Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1472 ATGTGCTTATTGTTTCCCTGCTATATATACCCACATTTCGCCATAAAGTTTCACACTTACCACTACTACCAATACTCCTCGCACAACACAACCACAATGGCCGCGAAGAAGAAGAATGGCGGCGGAAACGGCAACAACAAGGAGAACGAAGACAGCACCATCACCGTCGTCTTGAAGGTCGAAATGCACTGCGACGGTTGCGCTTCCAAAATCATCAAACACCTCCGCTGTTTCCAAGGTGTGGAGACGGTGAAGGCTGATAGCGACGCCGGGAAGGTGACCGTGACCGGAAAAGTGGACCCCACGAAAGTGAGGGATAACCTGGCGGAGAAGATAAGGAAGAAGGTGGAACTGGTGTCTCCGCAGCCCAAGAAGGAGCAGGAGAACGAGAAAGAGAACAAGGATGCTAAGGCAAACAACAAATCCGAGAATAACAAAACCCAGGACAAAAAAACCAAGGACAAAGAGGTGGTAACCACCGCTGTTCTGAAGCTGGCATTGCATTGCCAGGGTTGCCTAGACAGGATTGGCAAAACTGTGTTGAAAACCAAAGGAGTGCAAGAAATGGCCATTGACAAGGAAAAGGAAATGGTGACTGTGAAAGGGACAATGGATGTTAAGGCTCTGGCAGAGAATCTCATGGAGAAGCTGAAGAGGAGGGTTGAGGTGGTTCCTCCAAAGAAAGACAAGGAAGGTGGTGGTGGTGATGATGAGAAGGAAGTATCAGGGAAGAAGAAGAACAAGGGTGGTGGTGGAGGAGACAAGAATGAGAATATTGAAGATGGAATAGAGAAAATAGAGTATAACAGAATGGAGTATTTGGCACCACCTGCTTTTGGCTTTGGTTATGGACCTTATGGTGGTGGTTATGGACATGGACATGGGCATGGGCATGGCAACATTGGTGGGTATAGCTATGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTGCATGCACCACCACCACAAATTTTCAGTGATGAAAACCCGAATGCTTGTTCTGTCATGTGA 1014 0.4793 MCLLFPCYIYPHFAIKFHTYHYYQYSSHNTTTMAAKKKNGGGNGNNKENEDSTITVVLKVEMHCDGCASKIIKHLRCFQGVETVKADSDAGKVTVTGKVDPTKVRDNLAEKIRKKVELVSPQPKKEQENEKENKDAKANNKSENNKTQDKKTKDKEVVTTAVLKLALHCQGCLDRIGKTVLKTKGVQEMAIDKEKEMVTVKGTMDVKALAENLMEKLKRRVEVVPPKKDKEGGGGDDEKEVSGKKKNKGGGGGDKNENIEDGIEKIEYNRMEYLAPPAFGFGYGPYGGGYGHGHGHGHGNIGGYSYVPVYPEQMHFHLHAPPPQIFSDENPNACSVM* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1472 337 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 36 337 IPR044594 GO:0046872
Gso11g1472 337 MobiDBLite consensus disorder prediction 113 154 - -
Gso11g1472 337 CDD HMA 57 117 IPR006121 GO:0046872
Gso11g1472 337 MobiDBLite consensus disorder prediction 221 259 - -
Gso11g1472 337 CDD HMA 167 222 IPR006121 GO:0046872
Gso11g1472 337 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 36 337 - -
Gso11g1472 337 Pfam Heavy-metal-associated domain 166 218 IPR006121 GO:0046872
Gso11g1472 337 Pfam Heavy-metal-associated domain 58 115 IPR006121 GO:0046872
Gso11g1472 337 Coils Coil 124 146 - -
Gso11g1472 337 SUPERFAMILY HMA, heavy metal-associated domain 158 221 IPR036163 GO:0046872
Gso11g1472 337 Gene3D - 155 231 - -
Gso11g1472 337 Gene3D - 53 127 - -
Gso11g1472 337 SUPERFAMILY HMA, heavy metal-associated domain 51 114 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1472 Gso-Chr11 17095847 17097817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1472 - - gsj:114377132 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1472 11 17095847 17097817 Gso11g1472 11 17095847 17097817 ECH
Gso12g0648 12 6224213 6226199 Gso11g1472 11 17095847 17097817 GST