Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0639 ATGGACCCTCAAGTAGAACTCTCATCATCACTTCACTCTCCCTCTGAGATCATTAGGAAAAGGAAAATTACTGGGCGGCAAAAGAGAGAGGAACTTGAAAAAGAGGTCGCAATGCTTCAAAGGTTGTTGGACCAAGAAGAAAAGTTTCATGAGATTTTGGAGATGGTGCATAATAGACCAAATGGGTCATCGATATCAATTCCCAATTTTCTTCCACCCAAGATGCGAGAACTCTTAGGAGAGCTAGTCATGATTGAGGGTGAGATAGCGAGACTTGAATCCCAAATAAGTCAACTCCAAGATGGTTTGAAACGTGAACAAGAAATCACCATGGAATCAAAGCCTAAAACGTGGAATCAAGGGAATTTGACCAATTCTAACAATCACTTATCAACTTCACCGGTTCCAAATCCTAGTCCTATTCGCAGAATTTTTCAAGAAAGGATGGCATTTGAAACCAAGGCGTTGCATTTCATAAGCAAAGCTATAAAGGGCGATTATAATCTCAATGACTTCAGTTATAATGACAAGGCAGGGTTTTTTAAAACTTCTGTCGAACAGAAAGAAAGTAAGTTCCAAGATGTGAAATTTCAAGAAAGACTTCCTAGAAAAAATGGGATAGTGAAGCCTCCTTCACCTATGCGTGACCCCCACCATCCATCACCCAAGTTGCGGGAGCGCAATCCAGAGATGATGTACTTGGATCTCCCAACCAGATCACTACTGGATCCACTTCTGTCAGAAGAGAATGATCTCAAGTGGCAGCCCAACAAGCTATCTGAGAGCATCATGAAGTGTTTGAATTTCATATATGTGAGACTACTGAGAACATCAAGAGCAATAGAGTTGGAAAAATCAGGGCCAATTTCAAGGTCTGTGCACTCTTCTTTAAGCTCAAGAAGCTTCAGGGTGGATACTGGGTCAAACCCAAAACAAAGCCTCTTGTTGCAAAAGGAATCGAGGCAGCAAGATCCATATGGTATTTTTAACACAGAAGAGTCCATTCCAAGGGACATTGGTCCTTATAAGAACTTGGTCATATTCACCTCCAGCTCTATGGATCCCAAGTTCATCTCAAGTCCATCCTCTATACCATTACTAAGGAAGTTAAGGATCTTGATGAGCAATCTTCAAACAGTTGACTTGAAAAGCCTTACAAACCAACAGAAATTAGCATTCTGGATCAATGTGTACAACGCTTGTATCATGCATGGATTTATCCAATATGGAGTGCCATCGACCCCAGAAAAACTACTTGCATTGATGAACAAGGCAACCCTCAACGTAGGAGGGAACATAATAAACGCTCAAGCAATAGAGCATTTCATATTGAGGAAACGAGATATTTCTAATGTGAAAGAGGTACAGCGAAAGGTTGAATGGGAGGAGAAAGAATCGTTTGTCCGTGAACTTTATGGACTTGAGTTTAATGATCCTAATGTAACATTTGCTCTGTGTTGTGGAACTCGTTCTTCTCCTGCTGTGAGGATATACACAGCAGATGGAGTTACAGCTGAATTGGAGAAATCAAAACTAGACTATCTTCAGGCTTCAATTCTGGCTACTAGCACCAAAAGAATAGGATTCCCGGAGCTCTTTCTCAGAAACATGCTTGATTTTGCTGTGGACACAGACTCACTGGTAGAGTGGGTATGCAGCCAGTTACCTACATCTGGGACTCTAAGGAAATCAATGGTGGATTGCTTTAGAAGCCACAGTAATGAGAAGCCTTCTACCATTGTTGAAAAGATACCCTATGACTATGAATTTCAGTATTTGTTGACAATATAA 1791 0.4093 MDPQVELSSSLHSPSEIIRKRKITGRQKREELEKEVAMLQRLLDQEEKFHEILEMVHNRPNGSSISIPNFLPPKMRELLGELVMIEGEIARLESQISQLQDGLKREQEITMESKPKTWNQGNLTNSNNHLSTSPVPNPSPIRRIFQERMAFETKALHFISKAIKGDYNLNDFSYNDKAGFFKTSVEQKESKFQDVKFQERLPRKNGIVKPPSPMRDPHHPSPKLRERNPEMMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAIELEKSGPISRSVHSSLSSRSFRVDTGSNPKQSLLLQKESRQQDPYGIFNTEESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKSLTNQQKLAFWINVYNACIMHGFIQYGVPSTPEKLLALMNKATLNVGGNIINAQAIEHFILRKRDISNVKEVQRKVEWEEKESFVRELYGLEFNDPNVTFALCCGTRSSPAVRIYTADGVTAELEKSKLDYLQASILATSTKRIGFPELFLRNMLDFAVDTDSLVEWVCSQLPTSGTLRKSMVDCFRSHSNEKPSTIVEKIPYDYEFQYLLTI* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0639 596 MobiDBLite consensus disorder prediction 116 138 - -
Gso12g0639 596 Pfam Leucine-zipper of ternary complex factor MIP1 25 104 IPR025757 -
Gso12g0639 596 Coils Coil 29 49 - -
Gso12g0639 596 PANTHER TRANSPORTER, PUTATIVE-RELATED 8 596 - -
Gso12g0639 596 Coils Coil 75 109 - -
Gso12g0639 596 MobiDBLite consensus disorder prediction 204 225 - -
Gso12g0639 596 Pfam Protein of unknown function, DUF547 383 515 IPR006869 -
Gso12g0639 596 PANTHER EXPRESSED PROTEIN 8 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0639 Gso-Chr12 6073540 6080310 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0639 - - gmx:100793574 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0639 12 6073540 6080310 Gso11g1486 11 17284542 17291165 GST