Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1486 ATGATGTCCCACTCCCACCAGCACCCACAACCACAACAAAGACGGTTATTATCTCAATGCCTGAACCAACTTCGTGAACACCCTGCTGAAAGCTCCTTCTCATCTTCTCAAACACATTACAAAACCAAAATCCCCTTATGTCTTATTCACTCCGAAACAACGTCAACTACATCAACCCCAAGACACTCTTTCTTTGGCCCCAAGATTGTGTCATCATCCCCTCACCAACACTACTACTTCCATGAACCTCACAGCCCCTCCTCCTCATTCCCTTGTAATTGTTTTAATGTCTCTTCGAGGCGTTGGAGTGCCTTCAAGCTTGGTTGCACCTCCATGGACCCTCAAGTAGAATTCTCATCATCACTTCACTCTGCCTCTGAGATCATTAGGAAAAAGAAAATTACTGGGCGGCAAAAGAGAGAGGAACTTGAAAAGGAGGTCGCTATGCTTCAAAAGTTGTTGGACCAAGAAGAAAAGTTTCATGAGATTTTGGAGATGGTGCATAGTAGACCAAATGGGTCATCGATATCAATTCCCAATTTTCTTCCACCCAAGATGAGAGAACTCTTAGGAGAGCTAGTCATGGTTGAGGGTGAGATAGCTAGACTTGAATCCCAAATAAGCGAACTCCAAGCTGATTTGAAACATGAACAAGAAATCACCAAGGAATCAAAGCCTAAAACGTGGAATCAAGGGAACTTGAGCAATTCTAACAATCACTTATCAACTTCTCCGGTTCCAAATCCTAGTCCTATTCGCAGAAATGTTCAAGAAAGGATGGCATTTGAAACCAAGGCGTTGCATTTCATAAGCAAAGCTATAAAGGGCGATTACAATCTCAATGACTTCAGTTATAATGACAAGACAGGTTTTGTTAAGACTTCTGTCGAACCGAAAGAAAGTAAGTTCCAAGAAGATGTGAAATTTCATGAAAAACTTCCAAGAAAAAATGGGATGGTGAAGCCTCCTTCACCTATGCGTGACCCCCGCCATCCATCACCCAAGTTTCGGGAACGCAATCCAGAGATGTACTTGGATCTCCCAACTAGATCACTACTTGATCCACTTTTGTCAGAAGAGAATGATCTCAAGTGGCAACCCAACAAGCTATCTGAGAGCATCATGAAGTGTTTGAATTTCATTTATGTGAGACTACTCAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGGCCAATTTCAAGGTCTGTGCACTCTTCCTTAAGCTCAAGAAGCTTCAGGGTGGACATTGGATCAAACCCAAAACCAAGCCTCTTGTTGCAAAAGGAATCAAGGCAGCAAGACCCATATGGTATCTTTAACACAGAAGAGTCCATTCCAAGGGACATTGGTCCTTATAAGAACTTGGTCATATTCACCTCTAGCTCTATGGATCCCAAGTTCATCTCAAGTCCATCCTCTATACCATTACTAAGGAAGTTAAGGATCTTGATGAGCAATCTTCAAACAGTTGACTTGAAAAGCCTTACAAACCAACAGAAATTAGCATTCTGGATCAATGTGTGCAATGCTTGCATCATGCATGGATTTATCCAATATGGAGTGCCATCTACCCCAGAAAAATTACTTGCATTGATGAACAAGGCAACTCTCAACGTAGGAGGCAACATAATAAACGCTCAAGCAATAGAGCATTTCATATTGAGGAAACGAGATATTTCTAATGTGAAAGAGGTACAGCGAAAGGGTGAATGGGAGGAGAAAGAATCGTTTGTCCGTGAACTTTATGGACTTGAGTTTAATGATCCTAATGTCACATTTGCTCTGTGTTGTGGAACTCGTTCTTCTCCAGCTGTGAGGATATACACAGCAGATGGTGTTACAGCTGAATTGGAGAAATCAAAGCTAGACTATCTACAGGCTTCAATTCTGGCAACTAGCACCAAAAGAATAGGATTCCCAGAGCTCCTTCTCAGAAACATGCTTGATTTTTCTGTGGACACAGACTCACTGGTGGAGTGGGTATGCAGCCAGTTACCTACATCTGGGACTCTAAGGAAATCAATGGTGGATTGCTTTAGAAGCCACAGTAATGTGAAGCCTTCTACCATTGTTGAAAAGATACCCTATGACTATGAATTCCAGTATTTGTTAACAATATAA 2124 0.4181 MMSHSHQHPQPQQRRLLSQCLNQLREHPAESSFSSSQTHYKTKIPLCLIHSETTSTTSTPRHSFFGPKIVSSSPHQHYYFHEPHSPSSSFPCNCFNVSSRRWSAFKLGCTSMDPQVEFSSSLHSASEIIRKKKITGRQKREELEKEVAMLQKLLDQEEKFHEILEMVHSRPNGSSISIPNFLPPKMRELLGELVMVEGEIARLESQISELQADLKHEQEITKESKPKTWNQGNLSNSNNHLSTSPVPNPSPIRRNVQERMAFETKALHFISKAIKGDYNLNDFSYNDKTGFVKTSVEPKESKFQEDVKFHEKLPRKNGMVKPPSPMRDPRHPSPKFRERNPEMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPISRSVHSSLSSRSFRVDIGSNPKPSLLLQKESRQQDPYGIFNTEESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKSLTNQQKLAFWINVCNACIMHGFIQYGVPSTPEKLLALMNKATLNVGGNIINAQAIEHFILRKRDISNVKEVQRKGEWEEKESFVRELYGLEFNDPNVTFALCCGTRSSPAVRIYTADGVTAELEKSKLDYLQASILATSTKRIGFPELLLRNMLDFSVDTDSLVEWVCSQLPTSGTLRKSMVDCFRSHSNVKPSTIVEKIPYDYEFQYLLTI* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1486 707 MobiDBLite consensus disorder prediction 225 251 - -
Gso11g1486 707 MobiDBLite consensus disorder prediction 218 252 - -
Gso11g1486 707 Coils Coil 186 220 - -
Gso11g1486 707 Pfam Protein of unknown function, DUF547 494 626 IPR006869 -
Gso11g1486 707 Coils Coil 140 160 - -
Gso11g1486 707 Pfam Leucine-zipper of ternary complex factor MIP1 136 217 IPR025757 -
Gso11g1486 707 PANTHER TRANSPORTER, PUTATIVE-RELATED 118 707 - -
Gso11g1486 707 PANTHER EXPRESSED PROTEIN 118 707 - -
Gso11g1486 707 MobiDBLite consensus disorder prediction 315 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1486 Gso-Chr11 17284542 17291165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1486 - - gmx:100809848 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1486 11 17284542 17291165 Gso11g1486 11 17284542 17291165 ECH
Gso12g0639 12 6073540 6080310 Gso11g1486 11 17284542 17291165 GST