Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso12g0631 | ATGGCGGGCAAAGGTGGATCAACTCCGGCCACATATTCGCCGTCTCCGACGACCGATAAGAAGAAACCATCGCTTTTCAATGAGGATTTGGCTCGACCTGATGGCCGCAGTTTCCACCAGTGCAGACCCGCATTTTTCAGGACTGGTGCTGTGAATGCTGCATCTGGATCTGCTTATGCTGAGGTTGGAAATACCAAGGTCATTGTATCAGTATTTGGGCCAAGAGAGAGCAAGAAGGCGATGATGTACAGTGATATAGGGCGTTTGAATTGCAATGTCAGCTTTACAACGTTTGCAACTCCGATTCGTGGGCAGGGTTCAGACCACAAAGAGTACAGTTCAATGCTTCATAAAGCTTTGGAGGGAGCAATAATACTGGAAACATTCCCCAAGACAACTGTGGACGTCTTTGCATTGGTGCTGGAATCTAGTGGCAGTGATCTCCCAGTTGTCATATCATGTGCAAGCCTTGCTCTTGCAGATGCGGGAATAATGATGTATGATCTTGTTGCCTCAGTTTCTGTGTCATGTTTTAATAAGAACCTTGTCATTGATCCTGTTTTGGAGGAGGAAAATGGCCAAGATGGAAGCTTAATGATTACTTGCATGCCTTCTCGCTATGAAATCACCCAACTCACCGTTACTGGGGAATGGTCCACCCCAAAGATTAACGAGGGAATGCAGCTGTGTTTGGATGCTTGTGCAAAGCTTGCGAAGATTATGAGGTCATGTTTAAAAGAAGCTGTTTCGGATTCCCAGGAATAG | 765 | 0.4614 | MAGKGGSTPATYSPSPTTDKKKPSLFNEDLARPDGRSFHQCRPAFFRTGAVNAASGSAYAEVGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYSSMLHKALEGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSCFNKNLVIDPVLEEENGQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKIMRSCLKEAVSDSQE* | 255 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso12g0631 | 254 | SUPERFAMILY | Ribonuclease PH domain 2-like | 166 | 251 | IPR036345 | - | |
| Gso12g0631 | 254 | Pfam | 3' exoribonuclease family, domain 2 | 168 | 228 | IPR015847 | - | |
| Gso12g0631 | 254 | PANTHER | EXOSOME COMPLEX COMPONENT MTR3 | 9 | 250 | - | - | |
| Gso12g0631 | 254 | Pfam | 3' exoribonuclease family, domain 1 | 40 | 164 | IPR001247 | - | |
| Gso12g0631 | 254 | PANTHER | EXOSOME COMPLEX COMPONENT | 9 | 250 | - | - | |
| Gso12g0631 | 254 | CDD | RNase_PH_MTR3 | 41 | 247 | - | - | |
| Gso12g0631 | 254 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Gso12g0631 | 254 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 31 | 191 | IPR020568 | - | |
| Gso12g0631 | 254 | Gene3D | - | 18 | 253 | IPR027408 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso12g0631 | Gso-Chr12 | 5960502 | 5965676 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso12g0631 | K12587 | - | gmx:100816271 | 498.049 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso12g0631 | 12 | 5960502 | 5965676 | Gso11g1498 | 11 | 17464227 | 17469500 | GST |