Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1498 ATGGCGGGCAAAGGTGGAGCAACTCCGGCGACATACTCGCCATCTCCGACGACCAATAGGAAGAAGAAACCACCGATTTTCAAGGAGGATTGGGTTCGACCCGATGGCCGCGGTTTTCACCAGTGCAGACCCGCGTTTTTCAGGACTGGTGCTGTGAATGCTGCATCTGGATCTGCTTACGCTGAGTTTGGAAATACCAAGGTCATTGTATCAGTATTTGGGCCAAGAGAGAGCAAGAAGGCGATGATGTACAGTGATATAGGGCGTTTGAATTGCAATGTCAGCTTTACAACGTTTGCAACTCCGATTCGTGGGCAGGGTTCAGACCACAAAGAGTACTGTGCGATGCTTCATAAAGCTTTGGAGGGTGCAATAATACTGGAAACATTCCCCAAGACAACTGTGGACGTTTTTGCATTGGTGCTGGAATCTAGCGGCAGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTTGCAGATGCTGGAATAATGATGTATGATATAGTTGCCTCAGTTTCTGTGTCATGTTTTAATAAGAACCTTGTCATTGATCCTATTTTGGAGGAGGAAATTGGCCAAGATGGCAGCTTAATGATTACTTGCATGCCTTCTCGCTATGAAATCACCCAACTCACCGTTACTGGGGAATGGTCCACCACAAAGATTAATGAGGGAATGCAGCTGTGTTTGGATGCTTGTGCAAAGCTTGCGAAGATTATGAGGTCATGTTTAAAAGAAGTTGCTTCGGATTCCCAGGAGTAG 768 0.4661 MAGKGGATPATYSPSPTTNRKKKPPIFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYCAMLHKALEGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDIVASVSVSCFNKNLVIDPILEEEIGQDGSLMITCMPSRYEITQLTVTGEWSTTKINEGMQLCLDACAKLAKIMRSCLKEVASDSQE* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1498 255 PANTHER EXOSOME COMPLEX COMPONENT 17 250 - -
Gso11g1498 255 SUPERFAMILY Ribonuclease PH domain 2-like 167 251 IPR036345 -
Gso11g1498 255 MobiDBLite consensus disorder prediction 1 30 - -
Gso11g1498 255 CDD RNase_PH_MTR3 42 248 - -
Gso11g1498 255 PANTHER EXOSOME COMPLEX COMPONENT MTR3 17 250 - -
Gso11g1498 255 Pfam 3' exoribonuclease family, domain 2 169 229 IPR015847 -
Gso11g1498 255 Pfam 3' exoribonuclease family, domain 1 41 165 IPR001247 -
Gso11g1498 255 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 192 IPR020568 -
Gso11g1498 255 Gene3D - 20 254 IPR027408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1498 Gso-Chr11 17464227 17469500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1498 K12587 - gmx:100819105 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1498 11 17464227 17469500 Gso11g1498 11 17464227 17469500 ECH
Gso12g0631 12 5960502 5965676 Gso11g1498 11 17464227 17469500 GST