Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0628 ATGTTAGAGGACATTGAATCATCTACTCAGCTTTGTAAAATGGGATTTGGTCGAAATTCGACCTCGAGAAGCGGTGATTACTTGGAAGGGATGCTCAATGACTATGTTGGGGGAAGGAACAAACTGAAGGCTCAGAAAAGTGTTGCCACAACTAAGTTTGTGGCAGCACTCACGTGCCTTCAATTTTTCTTTGCAGTCTATGCAACATTCCTATTGTATTACATGGGCCCTTCCATCGATTTAAGAACCAAGCCAGAGTTCACATGGGCTACAAAAATTGCCCAACAATGGAAGCAACTCATGATCACACCCCATGTTATTGGTCACTACCAAGAAGCTGCTTCCTCTCTCATCAAGGAGGATCTTCTTCCCACAACTCCTTCCCAAGTGTGTGAGAATGAGAAAATAGACTTCATGCAAAAGAAGTCCAATGATGTCCAAATGATAAAGATAAAGAGAGAGCTCTACGATGAGGTGTTGAACTTCCAAAGCAAAACCATTGGCACCGAGACTCTCCAAGAGCTAATGGCAATGAAATCCAAATGGGACTTAAAGGGTCCAAAGAGGCCAAAAATCACAGTGTTGCTAAACCACTTCAAGAGAAAGACACTTTGTGCACAGCTTGATTCTTTGCTCCAACAAACCCTCCCTTTTCATCATGTTTGGGTGCTCTCATTTGGGAGCCCCAATGAGGTCTCATTGAAGAGAATTGTGGACACCTATAACGACTCGAGAATCAGCTTCATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGAGGCTGATCTTGTTTATGTTGTTGATGATGACATGATTCCTGGAAGGAAGATGCTGCAGATTTTGTCACACGTGGCTGGGACAGACAAGTACAAGAATTCTGTTTTGGGGAGTATTGGAAGGATATTGCCCTTTAGACAGAAGGATTTCACTTTCCCAAGTTACAGAAAATTTCGGTCTAAGGAGGCAGGGTTGTATTTGCCCGATCCTGCTTATGATATCACTGTTGATAAAATTGTGCAGGTGGATTTTCTTTCTAGTTCATGGTTTCTCTCAGCTGATCTTGTCAAGACACTCTTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTTCACCTCAGCTATCAGCTTCAAAAGTACAAAAATGCTGGCTCATTTGTTCTTCCAGTGGATCCTAAGGACAAGGAAACTTGGGGTGATAGTGAACACAGGCTTGCATATGTGTCTGAAACCACAGTGATTTTCAAGGATGTGGTTCAAGTCAGAGATGATCAATGGTGGAAAGCACTTTCCACAGGTTATGTGACTCAGTGGGCTGCAATGTACCCTCAAAAAATTGATGCACTCTTCTATGCTCACTCAGTTGATGAAGTGAAAGTCCTTGCACCACTTCTTGAAAAGTTCAGGTCCACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAGGCAATTACTGCCCTTGTGAAGATGCTGCAAGAGCTCTCAAATGGCCTGCATTGGTCTGCAAGGAACGCCGGTTTAAGATTTTTGATTTGGCCGTCGAAGCCCTTTCAGGGGTGTCAGATTCTGAGGCACCAGTGATACATGCAGTGTACACCAGCTTGAAGGGTTTGATCAAAATTCACAATCCCAGTTTAGTGATCAGTGTGGCTGAAATTGACCCTCATGTGAGAAAAGCTCTCAAGATGGCCTCAGAAACCAACTCAAATGGCACCACATTTGTTCTTTTACCAAGTTCTTCAGTTTCTCAAGTTCTTTGGATGGCTGATCTGCGTTCAACAGCATTACCAAATTGGAATCGGATGAGGATCTCTGTGAACATCATCACACAAAATAGAGTCAATTCACTAGCAAGGCTTCTCAAATCTCTCAGCAATGCCTACTATCTTGGAGATGAAATCCCCATTACTTTTAACATGGATAGCAAGGTAGATGAGGCAACTATAAGACTAGTAGGTTCATTTGAGTGGCCTCATGGGACCAAAACCCTGAGAAGGAGAATCGTCCAAGGAGGGCTCATCCGGGCTGTGAGTGAGAGTTGGTATCCATCTTCTGATGATGACTTTGGACTCCTACTAGAAGACGACATTGAAGTTTCCCCTTACTACTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGACCCCCAAGTCTCTCTCCCTGAGCTCTCCTCCATCTCCCTCTACACTCCAAAACTTGTTGAAGTTGTCAAAGAGAGGCCAAAATGGAATGCCACAGAATTCTTCAAACACATCCACCCCAACACACCTTACCTTCATCAACTACCTTGCAGCTGGGGGGCAGTGTTCTTCCCCAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCCAAGGCCAACCCAGTTCAAATTCCAAAGTCTAGAACAAATGGATGGCAAGCTTCATGGAAGAAGTTCCTCATAGACATGATGTACCTTAGAGGGTATGTTAGTCTCTACCCAAATTTCCCACAACAAGCAAGCTTTTCAACCAACCATATGGAACCAGGGGCACACATTAGTGCAAAAGACAATGTGGTTAAGCACAACAAACGAGACTTTGAGGTGCCACTAATGAAAGAAGACTTTAGAAACTTTTTGCCAGCAATGAAAATGCCTCCAGCACCAAGGCTTCCATCTCTGAACCTCTTCAATCAACCAGTTTCTCTAAAGGGTCTCAAAGCTGCTGGAGCTAAGTTGGGACAAGATGTGCTTAGATGTGACAATGCCACTGAGGTTGTTGCTGTTGACAAAGATACTGGTCTACCTCACACTTGCTCCAAATTCTGA 2841 0.4372 MLEDIESSTQLCKMGFGRNSTSRSGDYLEGMLNDYVGGRNKLKAQKSVATTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVIGHYQEAASSLIKEDLLPTTPSQVCENEKIDFMQKKSNDVQMIKIKRELYDEVLNFQSKTIGTETLQELMAMKSKWDLKGPKRPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHVWVLSFGSPNEVSLKRIVDTYNDSRISFISSSYDFKYYGRFQMALQTEADLVYVVDDDMIPGRKMLQILSHVAGTDKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFIETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDVVQVRDDQWWKALSTGYVTQWAAMYPQKIDALFYAHSVDEVKVLAPLLEKFRSTVGKKAYIVVSGGNYCPCEDAARALKWPALVCKERRFKIFDLAVEALSGVSDSEAPVIHAVYTSLKGLIKIHNPSLVISVAEIDPHVRKALKMASETNSNGTTFVLLPSSSVSQVLWMADLRSTALPNWNRMRISVNIITQNRVNSLARLLKSLSNAYYLGDEIPITFNMDSKVDEATIRLVGSFEWPHGTKTLRRRIVQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKANPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHNKRDFEVPLMKEDFRNFLPAMKMPPAPRLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCDNATEVVAVDKDTGLPHTCSKF* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0628 946 SUPERFAMILY Nucleotide-diphospho-sugar transferases 189 390 IPR029044 -
Gso12g0628 946 PANTHER OSJNBA0004B13.7 PROTEIN 41 946 - -
Gso12g0628 946 SUPERFAMILY Nucleotide-diphospho-sugar transferases 610 802 IPR029044 -
Gso12g0628 946 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 176 399 IPR029044 -
Gso12g0628 946 PANTHER - 41 946 - -
Gso12g0628 946 CDD Glyco_tranf_GTA_type 202 293 - -
Gso12g0628 946 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 612 861 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0628 Gso-Chr12 5901556 5906827 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0628 - - gmx:100790938 1874.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0628 12 5901556 5906827 Gso11g1500 11 17504635 17509855 GST