Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1500 ATGTTAGAGGACATTGAATCATCTACTACTCGGCTTTGTAAAATGGGATTCGGTCGAAATTCGACCTCAAGAAGCGGAGATTACTTGGAAGGAATGCTTAACGACTATGTTGGAGGAAGGAACAAACTGAAGGCTCAGAAGAGCGCCGCCACAACAACGAAGTTTGTGGCAGTGCTCACGTGCCTTCAGTTTTTCTTTGCAGTCTATGCAACATTCCTATTGTATTACATGGGCCCTTCCATTGATTTAAGAACCAAGCCAGAGTTCACATGGGCAACAAAAATTGCCCAACAATGGAAGCAACTCATCATCACGCCCCATGTTGTTGGCCACTACCAAGAAGCTGCTTCCTCTCTCATCAAGGAGGATCTTCTTCCCACAACTCCTTCCCAAGTGTGTGAGAATGAGAAGATAGACTTCATGCAAAAGAAGTCCAATGATGTCCAAATGATCAAGATAAAGAGAGAGCTCTATGATGAGGTGCTGAGCTTCCAAAGCAAAACCTTTGGCACCGAGACTCTCCAAGAGCTAATTTCAATGAAATCCAAATGGGACTTGAAAGGTCCAAACAGGCCAAAGATCACGGTTTTGCTAAACCACTTCAAGAGAAAGACACTTTGTGCTCAGCTCGATTCTTTGCTCCAACAAACCCTCCCTTTTCATCATGTTTGGGTGCTTTCATTTGGGAGCCCCAATGAGGCCTCATTGAAGAGAATTGTTGACACCTATAACGACTCAAGAATCAGCTTCATAAGCTCAAGCTACGATTTCAAGTACTATGGAAGGTTTCAAATGGCTCTTCAGACTGAATCTGATCTTGTGTACGTTGTTGATGATGACATGATTCCGGGAAGGAAGATGTTGCAGATTTTGGCACATGTTGCTGGGACAGACAAGTACAAGAATTCTGTCTTGGGGAGTATTGGAAGGATATTGCCCTTTAGACAGAAAGATTTCACCTTTCCAAGTTACAGAAAATTTCGGTCTAAGGAGGCAGGGTTGTATTTGCCTGATCCTGCTTATGATATCACTGTTGATAAAATTGTGCAGGTGGATTTTCTATCAAGTTCATGGTTCCTCTCTGCTGATCTTGTCAAGACACTCTTCACTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTTCACCTTAGCTATCAGCTTCAGAAATACAAAAATGCTGGTTCATTTGTTCTTCCAGTGGATCCTAAGGACAAGGAAACATGGGGTGATAGTGAGCACAGGCTTGCATATGTGTCTGAAACCACAGTGATTTTCAAGGATGTAGTTCAAGTCAGAGATGATCAATGGTGGAAAGCACTTTCCACAGGCTATGTGACTCAATGGGCTGCAATGTACCCTCAAAAAATTGATGCACTCTTTTATGCTCACTCAGTTGATGAAGTAAAAATGCTTGCACCACTTCTTGAAAAGTTCAGGTCCACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAGGCAATTACTGCCCTTGTGAAGATGCTGCAAGAGCTCTCAAATGGCCTGCATTGGTCTGCAAAGAACGCCGGTTTAAGATTTTTGACTTGGCCATTGAAGCACTTTCTGGGGTGTCAGATTCTGAGGCACCAGTGATACATGCAGTGTACACCAGCTTGAAGGGTTTGATCAAAATTCACAATCCCAGTGTAGTGATCAGTCTGGCTGACATTGACCCTCATGTGAGAAAAGCTCTCAAGATGGCCTCAGAAACCAACTCAAATGACACCACATTGGTTCTTTTACCAAGGTCTTCAGTTTCTCAAGTTCTTTGGATGGCTGATCTGCGTTCAACAGCATTGCCAAACTGGAATCGGATGAGGGTTTCTGTGAACATCATCACCCAAAATAGAGCCAATTCACTAGCAAGGCTTCTCAAATCTCTCAGCAATGCCTACTATCTCGGAGATGAAATTCCCATTACCTTCAACATGGATAGCAAGGTAGATGAGGCAACTATAAGACTAGTAGGTTCATTTGAGTGGCCTCATGGACCCAAAACCCTGAGAAGGAGAATCGTCCAAGGAGGTCTAATCCGCGCTGTGAGTGAGAGTTGGTATCCATCTTCTGATGATGACTTTGGACTCCTACTAGAAGATGACATTGAAGTTTCACCTTACTACTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGACCCTCAAGTCTCTCTACCTGAGCTCTCATCCATTTCACTCTACACTCCAAAACTTGTTGAAGTTGTCAAAGAGAGGCCAAAATGGAATGCCACAGAATTCTTCAAACACATCCACCCCAACACACCTTACCTTCACCAACTACCTTGCAGCTGGGGAGCAGTGTTCTTCCCAAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCCAAGTCCAACCCAGTTCAAATTCCAAAGTCTAGAACAAATGGATGGCAAGCTTCATGGAAGAAGTTCCTCATAGACATGATGTACCTTAGAGGGTATGTTAGTCTCTACCCAAATTTCCCACAACAAGCAAGCTTTTCAACCAACCATATGGAACCAGGGGCACATATTAGTGCTAAAGACAATTTGGTTAAGCATAACAAACAGGACTTTGAGGTGCCACTAATGAAAGAAGACTTTAGAAACTTTTTGCCAGCAATGAAAATGCCTTCAGCATCAAGGCTTCCATCTCTTAACCTCTTCAATCAACCAGTTTCTCTAAAGGGTCTCAAAGCTGCTGGAGCTAAGTTGGGACAGGATGTGCTTAGATGTGACAATGCCACTGAGGTTGTTGCTGTTGACAAAGATACTGGTCTACCTTACACTTGCTCCAAATTCTGA 2847 0.4341 MLEDIESSTTRLCKMGFGRNSTSRSGDYLEGMLNDYVGGRNKLKAQKSAATTTKFVAVLTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLIITPHVVGHYQEAASSLIKEDLLPTTPSQVCENEKIDFMQKKSNDVQMIKIKRELYDEVLSFQSKTFGTETLQELISMKSKWDLKGPNRPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHVWVLSFGSPNEASLKRIVDTYNDSRISFISSSYDFKYYGRFQMALQTESDLVYVVDDDMIPGRKMLQILAHVAGTDKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFTETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDVVQVRDDQWWKALSTGYVTQWAAMYPQKIDALFYAHSVDEVKMLAPLLEKFRSTVGKKAYIVVSGGNYCPCEDAARALKWPALVCKERRFKIFDLAIEALSGVSDSEAPVIHAVYTSLKGLIKIHNPSVVISLADIDPHVRKALKMASETNSNDTTLVLLPRSSVSQVLWMADLRSTALPNWNRMRVSVNIITQNRANSLARLLKSLSNAYYLGDEIPITFNMDSKVDEATIRLVGSFEWPHGPKTLRRRIVQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKSNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNLVKHNKQDFEVPLMKEDFRNFLPAMKMPSASRLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCDNATEVVAVDKDTGLPYTCSKF* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1500 948 SUPERFAMILY Nucleotide-diphospho-sugar transferases 189 391 IPR029044 -
Gso11g1500 948 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 178 401 IPR029044 -
Gso11g1500 948 PANTHER OSJNBA0004B13.7 PROTEIN 43 948 - -
Gso11g1500 948 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 615 863 IPR029044 -
Gso11g1500 948 SUPERFAMILY Nucleotide-diphospho-sugar transferases 612 803 IPR029044 -
Gso11g1500 948 CDD Glyco_tranf_GTA_type 204 295 - -
Gso11g1500 948 PANTHER - 43 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1500 Gso-Chr11 17504635 17509855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1500 - - gsj:114374559 1911.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1500 11 17504635 17509855 Gso11g1500 11 17504635 17509855 ECH
Gso12g0628 12 5901556 5906827 Gso11g1500 11 17504635 17509855 GST