Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0618 ATGAAAGGAATTGATTTGTTCTGTTCTTCCTCTGGTTCCACAGCAGTAACTTCTAGCATGCACCATCGTTCTACGTTACATCGAAGCACCAAAAGCTTCGACCATGATCGAAGGAAAAGCCAACTTCATGTCCCTTGTTCATCCCAATTGCCCATTAATCCTAAGCCTTACTTCGAGAAGCACAGAAAGAGTTCAGCTGATAAGCAAAACTGGGACATGCGTAGAAAAAGTTCTGCTGATGTTAACGACTTTTATACTCATACTCATGCTAGTGCTGATGGTTCATCCAGAAGATATCTCTTTGGTGATGGACCATTCATTGAATGGGTGTCTGAGTCCAATAAAATCTCAGCAATGGTTCCTTCTCAACATGATGTCAAAGTGAAAGACAAGCTCGTGGTTAAGAACAGAAACGATCTTCCCACTCTTCGGTCCTCTTCTTCAGCTCGCTCCAAGGATCAGGTTGTGGTTTTGAGGGTGTCATTGCATTGCAAGGCCTGCGAAGGAAAAGTTAGAAAACATATTTCAAAAATGGAAGGAGTGACATCATTCAGCATAGACATGGAGACAAAGAAAGTGATCATCGTCGGAGACGTGACACCACTAGGGGTACTGGCAAGTGTATCCAAGGTGAAGAATGCACAGCTTTGGCCATCTTCTACATCGTCATCCTCATTATTACTGTCATCATCTTCTAGGCCAACATCTCCATGGTCGACATAA 723 0.4315 MKGIDLFCSSSGSTAVTSSMHHRSTLHRSTKSFDHDRRKSQLHVPCSSQLPINPKPYFEKHRKSSADKQNWDMRRKSSADVNDFYTHTHASADGSSRRYLFGDGPFIEWVSESNKISAMVPSQHDVKVKDKLVVKNRNDLPTLRSSSSARSKDQVVVLRVSLHCKACEGKVRKHISKMEGVTSFSIDMETKKVIIVGDVTPLGVLASVSKVKNAQLWPSSTSSSSLLLSSSSRPTSPWST* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0618 240 Pfam Heavy-metal-associated domain 158 204 IPR006121 GO:0046872
Gso12g0618 240 MobiDBLite consensus disorder prediction 10 74 - -
Gso12g0618 240 ProSiteProfiles Heavy-metal-associated domain profile. 154 214 IPR006121 GO:0046872
Gso12g0618 240 Gene3D - 151 215 - -
Gso12g0618 240 MobiDBLite consensus disorder prediction 220 240 - -
Gso12g0618 240 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 230 - -
Gso12g0618 240 MobiDBLite consensus disorder prediction 27 42 - -
Gso12g0618 240 MobiDBLite consensus disorder prediction 56 74 - -
Gso12g0618 240 CDD HMA 157 210 IPR006121 GO:0046872
Gso12g0618 240 SUPERFAMILY HMA, heavy metal-associated domain 154 211 IPR036163 GO:0046872
Gso12g0618 240 PANTHER OS08G0405700 PROTEIN 1 230 IPR044526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0618 Gso-Chr12 5774008 5775580 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0618 - - gmx:100789886 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0618 12 5774008 5775580 Gso11g1224 11 11064931 11066725 GST