Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1224 ATGAAAGGAATTGACTTGTTCTGTTCTTCCTCTGCTTCCACAGCAGTAAATTCTAGCATGCACCATCGTTCTATGGTACATCGAAGCACCAAAAGCTTCGACCATGATCGAAGGAAAAGCCAACTTCATGTTCCTTGTTCATCCCAATTGCCCATCAATCCTAAGCCTTATAATTACTTTGAGAAGCACAGAAAGAGTTCAGCTTCAGCTGATAAACAAAACTGTGACGTGCGTAGAAAAAGTTCTGCTGATGTTAACGACCTTTATACTCATGCTGGTGCTGATGGTTCATCTAGAAGATATCTCCTTGGTGATGCGCCATTCATTGAATGGGTATCTGAGTCTAATAAAATCTCAGCAATGGTTCCTTCTCAACATGATGTCAAAGACAAGCTTGTGGTTATGAAAAGAAACGATCCTCCCACTCTTCGGTCCTCTTCTTCAGCTCGATCCAAGGACAAGGTTGTGGTTTTGAGGGTGTCATTGCACTGCAAGGCCTGCGAAGGAAAAGTTAGAAAGCATATTTCAAAAATGGAAGGAGTGACATCATTCAGCATAGACATGGAATCAAAGAAAGTGATCATCATTGGAGACGTGACACCATTAGGGGTACTGGCGAGTGTATCCAAGGTGAAGAGTGCACAGCTATGGCCATCTTCTACATCGTCATCCTCATTATTACTTTCATCATCTTCTAGGCCAACATCTCCATGGTCGACATAA 723 0.4246 MKGIDLFCSSSASTAVNSSMHHRSMVHRSTKSFDHDRRKSQLHVPCSSQLPINPKPYNYFEKHRKSSASADKQNCDVRRKSSADVNDLYTHAGADGSSRRYLLGDAPFIEWVSESNKISAMVPSQHDVKDKLVVMKRNDPPTLRSSSSARSKDKVVVLRVSLHCKACEGKVRKHISKMEGVTSFSIDMESKKVIIIGDVTPLGVLASVSKVKSAQLWPSSTSSSSLLLSSSSRPTSPWST* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1224 240 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 230 - -
Gso11g1224 240 MobiDBLite consensus disorder prediction 18 55 - -
Gso11g1224 240 SUPERFAMILY HMA, heavy metal-associated domain 154 211 IPR036163 GO:0046872
Gso11g1224 240 Pfam Heavy-metal-associated domain 158 203 IPR006121 GO:0046872
Gso11g1224 240 PANTHER OS08G0405700 PROTEIN 1 230 IPR044526 -
Gso11g1224 240 MobiDBLite consensus disorder prediction 27 42 - -
Gso11g1224 240 CDD HMA 157 210 IPR006121 GO:0046872
Gso11g1224 240 Gene3D - 151 214 - -
Gso11g1224 240 MobiDBLite consensus disorder prediction 218 240 - -
Gso11g1224 240 ProSiteProfiles Heavy-metal-associated domain profile. 154 214 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1224 Gso-Chr11 11064931 11066725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1224 - - gmx:100807544 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1224 11 11064931 11066725 Gso11g1224 11 11064931 11066725 ECH
Gso12g0618 12 5774008 5775580 Gso11g1224 11 11064931 11066725 GST