Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0588 ATGGAGTGGGTGAAGATGAAGGAGTACGCGAGAGAGTTCATGGTTGGAGTGGCGGAGATGACGGTGGAGTTCGGAAAAGGTTGCAGAGACATAGTCAAACAGAGTCTGGTCAACGACGACTCCTACATCGTCAAAAACTTCGGAAGAGACTCCTACATTGGAAAAACAGTGAGAGAACCTTTCGCTAAGCTTTTCGCCAAATTGAGTTTCTTCAACGAGTACTTACCTGAGGACAAGGATCCTCTCCACGCTTGGTCCGTTATTTTCTTCGTTTCCATACTCGCCTTCTTAGCTTTGTACGCGAATTTTGAATGTGATCCGTACGCCGCCGCGGCGCCGGTGAAGCAAGTGTTCGTGCATCCTCCTAGTGCCACTCGCGTAGTGCTTCCTGATGGAAGGTACATGGCGTATAAGGAGCAAGGCGTTTCTTCTCACAAAGCTAGGTTTTCGGTGATTGCTCCCCACAGTTTTCTTTCTTCCAGGCTTGCAGGGATTCCTGGAGTGAAAGATTCGTTGTTGGAAGAGTTTGGTATTCGTTTGTTGACGTATGATCTTCCTGGTTTTGGTGAGAGTGATCCTCATCCCAACCGGAATCTGGAATCCTCGGCGACTGATATGGCGTTTTTAGCAAATGCTCTTGATGTGGACAAGTTTTGGGTGGTTGGTTACTCAAGTGGCAGCATGCATGCTTGGGCTGCGCTTAGATACATTCCTGATAGGCTTGCTGGTGCAGCCATGTTTGCTCCCATGGTGAACCCATATGATCCTATAATGACAAAGGAAGAGAGACGAAGAACTTGGAAAAAATGGACACGAAAAAGAAAATTCATGTACTTCTTAGCTCGGAGGTTTCCTAGACTTCTTGCTTTCTTCTATCGGCGGAGCTTTTTGTCAGGAAAGCATGGTCAGATTGATAGGTGGCTGTCATTATCTCTGGGAAATAGGGATAAAGCACTGATGGAAGATCCAATCTATGGGGAATTCTGGCAAAGGGATGTGGAAGAATCAATCAGACAAAGAAATGTGAAACCCTTCATGGAGGAAGCTGCTTTGCAGGTCGCAAATTGGGGTTTCAGCCTTTCAGACCTCAAGTTGCAGAAGAGAAAACAGAGCAGTAATTTGCTCAGTTGGCTTAAGTCAATGTTCACTGAAACTGAGGAATATATGGGATTTCTTGGCCCTATACATATATGGCAAGGAATGGATGATAAAGTGGTTCCTCCATCGATGACTGATTTTGTGCACCGCTTGCTGCCCGGAGCTGCTGTACATAAACTCCCATATGAAGGTCATTTCACCTATATCTACTTTTGTCATGAATGCCACAGACAGATATTTACCACACTTTTTGGAACCCCACAAGGCCCACTCAGCATTTCTATAGAAGTAGATCAAGCTACCCTAGAAGAAACCAATATTGAACAGTAA 1428 0.4545 MEWVKMKEYAREFMVGVAEMTVEFGKGCRDIVKQSLVNDDSYIVKNFGRDSYIGKTVREPFAKLFAKLSFFNEYLPEDKDPLHAWSVIFFVSILAFLALYANFECDPYAAAAPVKQVFVHPPSATRVVLPDGRYMAYKEQGVSSHKARFSVIAPHSFLSSRLAGIPGVKDSLLEEFGIRLLTYDLPGFGESDPHPNRNLESSATDMAFLANALDVDKFWVVGYSSGSMHAWAALRYIPDRLAGAAMFAPMVNPYDPIMTKEERRRTWKKWTRKRKFMYFLARRFPRLLAFFYRRSFLSGKHGQIDRWLSLSLGNRDKALMEDPIYGEFWQRDVEESIRQRNVKPFMEEAALQVANWGFSLSDLKLQKRKQSSNLLSWLKSMFTETEEYMGFLGPIHIWQGMDDKVVPPSMTDFVHRLLPGAAVHKLPYEGHFTYIYFCHECHRQIFTTLFGTPQGPLSISIEVDQATLEETNIEQ* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0588 475 Pfam alpha/beta hydrolase fold 167 435 IPR000073 -
Gso12g0588 475 Gene3D alpha/beta hydrolase 118 436 IPR029058 -
Gso12g0588 475 PANTHER ALPHA/BETA FOLD HYDROLASE 9 471 - -
Gso12g0588 475 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 9 471 - -
Gso12g0588 475 SUPERFAMILY alpha/beta-Hydrolases 121 445 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0588 Gso-Chr12 5296999 5301422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0588 176 256 Acyl Lipid Metabolism Gene Families AT4G02340 30.952 3.83e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0588 - - gmx:100785642 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0588 12 5296999 5301422 Gso11g1253 11 11573145 11577193 GST