Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1253 ATGGAGTGGGTGAAGATGAAGGGGTACGCGAGAGAGTTCATGGTTGGAGTGGCGGAGATGACGGTGGAGTTCGGAAAAGGTTGCAGAGACATAGTTAAACAGAGTCTGGTCAACGACGACTCCTACATCGTCAAAAACTTCGGAAGAGACTCCTACATTGGAAAAACAGTGACAGAACCTTTCGCTAATCTTTTCCAGAAATTGAGTTTCTTCAACGAGTACTTGCCCGAGGATAAAGATCCTCTTCACGCTTGGTCCGTTATTTTCTTCGTTTCCATTCTCGCCTTCTTAGCTTTGTATGCGAATTTTGAACGTGATGCGTACGCGGCGGCCCCGGTGAAGCATGTGTTTGTGCATCCTCCGAGTGCTACTTGCGTAGTGCTTCCTGATGGAAGGTACATGGCGTATAAGGAGCAAGGTGTTTCTTCTCACAGAGCTAGGTTTTCGGTGATTGCTCCTCATAGTTTTCTTTCTTCAAGGCTTGCAGGGATTCCTGGAGTGAAAGATTCTTTGCTGCAAGAGTTTGGTATTCGTTTGTTGACGTATGATCTTCCTGGTTTTGGTGAGAGTGATCCTCATCCCAACCGGAATCTGGAATCCTCGGCAACGGATATGGCGTTTTTAGCGAATGCTCTTGGTGTGGACAAGTTTTGGGTGGTTGGTTACTCAAGTGGCAGCATGCATGCTTGGGCTGCACTTAGATACATTCCGGATAGGCTTGCTGGTGCAGCCATGTTTGCTCCCATGGTGAACCCGTATGATCCTATAATGACAAAGGAAGAGAGACGAAGAACTTGGAACAAATGGACACGAAGAAGAAAATTCATGTACTTCTTAGCTCGGAGGTTTCCTAGACTTCTCGCTTTCTTTTATCAGCGAAGCTTTTTGTCAGGAAAGCATGGTCAGATTGATAGGTGGCTGTCATTATCTCTGGGAAATAGGGATAAAGCACTGATGGAAGATCCAATGTATGAGGAATTCTGGCAAAGGGATGTGGAAGAATCAATCAGACAAAGAAATGTGAAACCCTTCATGGAGGAAGCTGCTTTGCAGGTCGCAAATTGGGGTTTCAGCCTTTCAGACCTCAAGTTGCAGAAGAGAAAACGGAGTAGTAATTTGCTCAGTTGGCTTAAGTCAATGTTCACTGAAACTGAGGAATATATGGGATTTCTGGGCCCTATACATATATGGCAAGGAATGGATGATAAAGTGGTTCCTCCATCAATGACTGATTTTGTGCACCGCGTGCTACCCGGAGCTGCTGTACATAAACTCCCATATGAAGGTCATTTCACCTATATCTACTTTTGTCATGAATGCCACAGACAGATATTTACTACACTTTTTGGAACCCCACAAGGTCCACTCAGCATTTCAATAGAAGTAGATCAAGCTAACCTAGAAGAAACCAATATTGAACAGCAAGTAGTAAACGATGGTGATTATGCCACAAACTAG 1458 0.4465 MEWVKMKGYAREFMVGVAEMTVEFGKGCRDIVKQSLVNDDSYIVKNFGRDSYIGKTVTEPFANLFQKLSFFNEYLPEDKDPLHAWSVIFFVSILAFLALYANFERDAYAAAPVKHVFVHPPSATCVVLPDGRYMAYKEQGVSSHRARFSVIAPHSFLSSRLAGIPGVKDSLLQEFGIRLLTYDLPGFGESDPHPNRNLESSATDMAFLANALGVDKFWVVGYSSGSMHAWAALRYIPDRLAGAAMFAPMVNPYDPIMTKEERRRTWNKWTRRRKFMYFLARRFPRLLAFFYQRSFLSGKHGQIDRWLSLSLGNRDKALMEDPMYEEFWQRDVEESIRQRNVKPFMEEAALQVANWGFSLSDLKLQKRKRSSNLLSWLKSMFTETEEYMGFLGPIHIWQGMDDKVVPPSMTDFVHRVLPGAAVHKLPYEGHFTYIYFCHECHRQIFTTLFGTPQGPLSISIEVDQANLEETNIEQQVVNDGDYATN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1253 485 PANTHER ALPHA/BETA FOLD HYDROLASE 9 473 - -
Gso11g1253 485 Gene3D alpha/beta hydrolase 117 438 IPR029058 -
Gso11g1253 485 SUPERFAMILY alpha/beta-Hydrolases 125 444 IPR029058 -
Gso11g1253 485 Pfam alpha/beta hydrolase fold 166 434 IPR000073 -
Gso11g1253 485 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 9 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1253 Gso-Chr11 11573145 11577193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1253 175 255 Acyl Lipid Metabolism Gene Families AT4G02340 32.143 7.37e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1253 - - gmx:100790561 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1253 11 11573145 11577193 Gso11g1253 11 11573145 11577193 ECH
Gso12g0588 12 5296999 5301422 Gso11g1253 11 11573145 11577193 GST