Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0573 ATGAAGCAAGCAACCCTTTTCTTCTTCTCACTCTTCCTACTCCTTTCCTCCACCACCATGGCCATTTCACCAGCACCTGCAGCAGCACCAAAAGCCACAGCAAAAACTCCTCCTACCCCAAAGGCAACAGCACCATCACCAAAACCATTAGTTCCCACAATACCTCAGTCTCCAGACTCTCCTGACTCGGTCCCCGACGACATCACCAGAATCCTGAAAAAGGCCAAAATGTTCTCAGTCCTAATCCGCCTCCTCAAAACCACCGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCAAGAGTGGCGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCCCTAAACGAAGGCCAGAAAATCGAACTTGTGCAGTTCCACATATTGCCCGAGTTTGTGTCCAGCTCAAACTTTGATTCTCTAAGCAACCCTGTGCAGACAGTGGCCGGTAAAGATCCCGCAAGGCTTCCATTGAACGTGAATGCATTAGGAAACAGTGTCAACATTTCAACCGGGGTCGTCAATGCCACCGTTCTCGGGGTAGTATACTCAGATAACAAACTTGGGATTTATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTATAACCAATAAGGCTCCAGCTTCAGCTCCATCAACTCTTGCAAAGTCTCCCAAAGCTGCTAAGGATAACTCTTCTGAGGACGATCAAGAAGAAACAAATCAGCATCAGAATAAATCTGGGGCAGTGAGTGTGGTTAGCATTGGTGGAGCAACGTTGATGTCGCTTGCGATAGCTTTGGTTGCAACCATGTTGAGTTGA 843 0.4733 MKQATLFFFSLFLLLSSTTMAISPAPAAAPKATAKTPPTPKATAPSPKPLVPTIPQSPDSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFITNKAPASAPSTLAKSPKAAKDNSSEDDQEETNQHQNKSGAVSVVSIGGATLMSLAIALVATMLS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0573 280 SUPERFAMILY FAS1 domain 44 212 IPR036378 -
Gso12g0573 280 PANTHER FASCICLIN DOMAIN PROTEIN 4 274 - -
Gso12g0573 280 MobiDBLite consensus disorder prediction 29 65 - -
Gso12g0573 280 SMART fasc_3 107 212 IPR000782 -
Gso12g0573 280 MobiDBLite consensus disorder prediction 224 255 - -
Gso12g0573 280 ProSiteProfiles FAS1/BIgH3 domain profile. 65 209 IPR000782 -
Gso12g0573 280 Pfam Fasciclin domain 77 211 IPR000782 -
Gso12g0573 280 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 274 IPR045003 -
Gso12g0573 280 MobiDBLite consensus disorder prediction 40 59 - -
Gso12g0573 280 Gene3D FAS1 domain 53 211 IPR036378 -
Gso12g0573 280 MobiDBLite consensus disorder prediction 235 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0573 Gso-Chr12 5143393 5144511 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0573 - - gmx:100793220 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0573 12 5143393 5144511 Gso11g1535 11 17821464 17822629 GST