Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1535 ATGAAGCAAGCAATCCTTTTGTCCTTCTCACTGTTGCTACTCCTTGCCTCCACCACCTTGGCCATTTCACCGGCACCTGCAGCAGCACCAAAAGCCGCAGCAAAAACTCCTCCTACCCCAAAGGCCGCAGCACCATCACCAAAACAATTAGTCCCAACTTTACCTCAGTCTCCAGACTCCCCTGACTCGGTCCCCGACGACATCACCAGAATTCTCAAAAAGGCCAAAATGTTCTCAGTCCTTATCCGCCTCCTGAAAACCACAGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCAAGAGTGGTGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCTGGCTTCCTCAACTCCTTAAACGAAGGCCAGAAAATCGAACTTGTGCAGTTCCACTTATTGCCCGAGTTTGTGTCGAGCTCAAACTTTGATTCTCTAAGCAACCCTGTGCAGACAGTGGCTGGAAAAGACCCTGCAAGGCTTCCACTAAACGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGCGTCGTCAACGCCACCGTTCTCGGGGTAGTATACTCGGATAACAAGCTTGGGATTTACCATGTGGACAAGGTTCTTCTTCCTCTAGATTTCTTTGTAACCAATAAGGCTCCAGCTTTGGCTCCAACAGCTCCTACAAAGGTTCCCAAAGATGCTAAGGATAACTCTTCAGAGGACGATCAAGAAGAAACAAACCAGGATCACAATAAATCCGGGGCAGTGAGTTTGGTTAGCCTTGGTGGAACAAAGTTGATGTCGCTTGGAATAGCTTTGGTCGCAGTAGCAACCATGTGGAGTTGA 849 0.477 MKQAILLSFSLLLLLASTTLAISPAPAAAPKAAAKTPPTPKAAAPSPKQLVPTLPQSPDSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHLLPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFVTNKAPALAPTAPTKVPKDAKDNSSEDDQEETNQDHNKSGAVSLVSLGGTKLMSLGIALVAVATMWS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1535 282 Gene3D FAS1 domain 48 211 IPR036378 -
Gso11g1535 282 PANTHER FASCICLIN DOMAIN PROTEIN 4 282 - -
Gso11g1535 282 MobiDBLite consensus disorder prediction 226 255 - -
Gso11g1535 282 SMART fasc_3 107 212 IPR000782 -
Gso11g1535 282 SUPERFAMILY FAS1 domain 49 212 IPR036378 -
Gso11g1535 282 MobiDBLite consensus disorder prediction 234 250 - -
Gso11g1535 282 Pfam Fasciclin domain 77 211 IPR000782 -
Gso11g1535 282 MobiDBLite consensus disorder prediction 30 65 - -
Gso11g1535 282 ProSiteProfiles FAS1/BIgH3 domain profile. 65 209 IPR000782 -
Gso11g1535 282 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 282 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1535 Gso-Chr11 17821464 17822629 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1535 - - gmx:100795316 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0573 12 5143393 5144511 Gso11g1535 11 17821464 17822629 GST