Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0572 ATGTCATCTAAACCTTCTTTTAACAAAACAAAAACCATGTTGAAGAAGCAATCTGTCTTGTCCTTCTCACTAGTAATGCTAATTTCATTTATGTATTCGACAACCACCTTAGCCCAATTATCACCAGCTTCAGCCCCTCTCAAACCGCCCCAACCTGCTCCTACCATACCAGCTGCGGCTCCTCAACAACCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACTCCTGAAAGTACTCCAGCACTTGACATTGTTGGAATCCTGAGGAAGGCAAAGTCATTCAACATCCTAATCCGTCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATTACCATTCTTGCACCTGATGACAGTGCCTTCTCAGAACTCAAAGCAGGGTTTCTCAACTCTCTTTCTGATGGGCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGACTATGTCTCTAGCTCCAACTTTGATACACTGACAAACCCTGTTAGAACACTAGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCACTGGCATTATATATACTGATAAGCATCTTGCTATTTATAAGGTGGGGAAAGTGCTTCTTCCTACGGACTTCTTTGCAGTTACCAAGGCACCTGCAAAATCACCCTCTTTGGCTCCAGAACCTTCAAGTGACACCGCAAAGGCACCTAAAGCTCATAAGGACGAGTCATCATCTTCAGATTCGTCACAGGTTAATCCCACTGAACAGAACTCTGGCACCGAGAAGATCGCTGTGTACGGAATGTGGATGTCACTTGGACTTGGAGTACTTCTCATGAGTGTGATGACAACATAA 918 0.4488 MSSKPSFNKTKTMLKKQSVLSFSLVMLISFMYSTTTLAQLSPASAPLKPPQPAPTIPAAAPQQPLVPSLPQSPSDSTPESTPALDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPTDFFAVTKAPAKSPSLAPEPSSDTAKAPKAHKDESSSSDSSQVNPTEQNSGTEKIAVYGMWMSLGLGVLLMSVMTT* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0572 305 SUPERFAMILY FAS1 domain 81 230 IPR036378 -
Gso12g0572 305 MobiDBLite consensus disorder prediction 45 68 - -
Gso12g0572 305 MobiDBLite consensus disorder prediction 240 279 - -
Gso12g0572 305 ProSiteProfiles FAS1/BIgH3 domain profile. 83 227 IPR000782 -
Gso12g0572 305 MobiDBLite consensus disorder prediction 42 81 - -
Gso12g0572 305 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 305 - -
Gso12g0572 305 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 305 IPR045003 -
Gso12g0572 305 Gene3D FAS1 domain 68 230 IPR036378 -
Gso12g0572 305 SMART fasc_3 125 230 IPR000782 -
Gso12g0572 305 Pfam Fasciclin domain 95 229 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0572 Gso-Chr12 5130672 5131871 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0572 - - gmx:100794280 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0572 12 5130672 5131871 Gso11g1531 11 17801184 17802351 GST