Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1531 ATGATGAACAAGCAATCTGTCTTGCCCTTCTCACTAGCATTGCTAGTTTCATTTTTGAATTGCACCGCCACCTTAGCCCAATTATCACCAGCTTCTGCCCCTCTCAAACCACCCCAACCTGCTCCTACCATACCAGCTGCTGCTCCTCAACAACCATTGGTTCCTTCATTGCCACAATCACCAAGTGATTCCACCCCTGACAGTACTCCAACTGTTGACATTGTTGGAATCCTGAGAAAGGCAAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCCGGAGGCATCACCATTCTTGCCCCAGATGACAGTTCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCACGTTATTTCAGACTACGTGTCTAGCTCCAACTTTGATACACTGACCAACCCCGTGAGAACACTGGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTATGGAGGGAGTGTGAACATCTCGACGGGTGAGGTGAACACCACCATCACTGGCATTATATATACCGATAAACATCTTGCTTTATATAAGGTGGGAAAGGTGCTTCTTCCTATGGACTTCTTTGTTGTTGCCAAGGCACCTGCAAAGGCACCCTCGTTGGCACCAGAACCTTCAAGTGACGCGGCAAAGGCGCCTAAAGCTGATAAGGATGAGTCATCATCTTCAGATTCGTCACAGGTTAATTCCGCTGAACAGAACTCTGGCACCGCCAAGATGATCAGTGTGTATGGAAAGTGGGTGTCAATTGGACTTGGACTTGGACTTGCATTGGTGGCAACAACGATGCAAACTTGA 894 0.4732 MMNKQSVLPFSLALLVSFLNCTATLAQLSPASAPLKPPQPAPTIPAAAPQQPLVPSLPQSPSDSTPDSTPTVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLALYKVGKVLLPMDFFVVAKAPAKAPSLAPEPSSDAAKAPKADKDESSSSDSSQVNSAEQNSGTAKMISVYGKWVSIGLGLGLALVATTMQT* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1531 297 Gene3D FAS1 domain 56 217 IPR036378 -
Gso11g1531 297 MobiDBLite consensus disorder prediction 33 56 - -
Gso11g1531 297 MobiDBLite consensus disorder prediction 31 71 - -
Gso11g1531 297 MobiDBLite consensus disorder prediction 230 265 - -
Gso11g1531 297 MobiDBLite consensus disorder prediction 57 71 - -
Gso11g1531 297 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Gso11g1531 297 SUPERFAMILY FAS1 domain 67 218 IPR036378 -
Gso11g1531 297 Pfam Fasciclin domain 83 217 IPR000782 -
Gso11g1531 297 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 286 IPR045003 -
Gso11g1531 297 SMART fasc_3 113 218 IPR000782 -
Gso11g1531 297 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1531 Gso-Chr11 17801184 17802351 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1531 - - gmx:100794781 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0572 12 5130672 5131871 Gso11g1531 11 17801184 17802351 GST