Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0568 ATGGTGATGATGAAGCACATTCCACTCTTCTCTCTCCCCCTTCTAATAGTACTATTTTCCCATTCCACCACCACTTTAGCCCAGTCACCGGCCGCGGCACCGACCGCCCCGGCCACCCCCTCCACCGCGGCCGCCCCGGCCCCGGTACCCTCGGCACCCCCGACAGACATCATAAGAATCCTCAAAAAGGCAGGAGGGTTCACAACCCTAATCCGCCTCCTCCAGGCCACACAAGTCTCCAACCAAATCAACTCCCAACTCCTCACCACAAGCGGCGGCCTAACCCTATTTGCACCAAACGACAACGCCTTCTCCAGCCTCAAACCGGGTTTCCTCAACTCCCTGAACGACCAACAGAAGAACGAGCTCATCCAGTTCCATTTGCTCCCCACGTACGTTTCCGTGTCGAATTTCGACACTTTAAGCAACCCTGTGAGAACACAGGCCGGTGAAAACCCTGATAGGTTGGCGCTGAACATAACAAGCTCCGGAGGGAACCAAGTGAACATGACAACGGGCGTTGTTAACGTTACTTTGGGTGGCACCGTGTACACCGATCACCAGCTCGCCGTGTATCAGGTGGACAAGGTGCTTCTTCCTCGGGACTTCTTTGAAGCTAAGCCTCCTGTTCCGGCTCCGGCGCCGGAAAAGGCGAAAGGGTCTAAGAAGAAATCTGCGGACAGCACTGCTACTACTGCAGATGATGCTGAATCGGATGCTATCAGTGTGAAACAAAGGCATGTTATGTGGGTTGCAGTTCTTGCACTTTTCATTGCAGCATTTACGTAA 789 0.5399 MVMMKHIPLFSLPLLIVLFSHSTTTLAQSPAAAPTAPATPSTAAAPAPVPSAPPTDIIRILKKAGGFTTLIRLLQATQVSNQINSQLLTTSGGLTLFAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPTYVSVSNFDTLSNPVRTQAGENPDRLALNITSSGGNQVNMTTGVVNVTLGGTVYTDHQLAVYQVDKVLLPRDFFEAKPPVPAPAPEKAKGSKKKSADSTATTADDAESDAISVKQRHVMWVAVLALFIAAFT* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0568 262 ProSiteProfiles FAS1/BIgH3 domain profile. 54 198 IPR000782 -
Gso12g0568 262 SUPERFAMILY FAS1 domain 34 201 IPR036378 -
Gso12g0568 262 Pfam Fasciclin domain 66 200 IPR000782 -
Gso12g0568 262 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 256 - -
Gso12g0568 262 MobiDBLite consensus disorder prediction 208 238 - -
Gso12g0568 262 SMART fasc_3 95 201 IPR000782 -
Gso12g0568 262 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 256 IPR045003 -
Gso12g0568 262 MobiDBLite consensus disorder prediction 30 50 - -
Gso12g0568 262 Gene3D FAS1 domain 31 201 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0568 Gso-Chr12 5114822 5116157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0568 - - gmx:100791643 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0568 12 5114822 5116157 Gso11g1528 11 17780948 17782157 GST