Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1528 ATGGTGATGATGAAATCTCTCCCACTTCTTCTAATAGTACTCTTTTCCCACTCTACCACCACCTTAGCCCAGTCCCCGGCCGCGGCACCGACCGCCCCGGCCACGCCCTCCACTGCAGCCGCCCCGGCCCCAGCACCCTCCGCACCCCCGACAGACATCATAAGAATCCTCAAAAAGGCAGGAGGGTTCACAACCCTAATCCGCCTCCTCCAGGCCACACAAGTCTCCAACCAAATCAACTCCCAACTCCTCACCACAAGCGGCGGCCTAACCCTATTTGCACCAAACGACAATGCCTTCTCCAGCCTCAAACCGGGTTTCCTCAACTCCCTCAACGACCAACAGAAGAACGAGCTCATCCAGTTCCACTTGCTTCCCACGTACGTTTCCGTCTCTAATTTCGACACTTTAAGCAACCCTGTGAGAACACAGGCCGGTGAAAACCCTGATAGGTTGGCGCTGAACATAACAAGCTCCGGAGGGAACCAAGTGAACATGACAACGGGCGTCGTTAATGTTACTTTGGGTGGTACGGTTTACACTGATCACCAGCTCGCGGTGTATCAGGTGGACAAGGTGCTTCTTCCTCGGGACTTCTTCGAAGCTAAGCCTCCCGCTCCGGCTCCGGCGCCAGAAAAGGCTAAAGGATCTAAGAAGAAATCTGTGGACAGCACTGCTACTCCTGCAGATGATGCTGAATCAGATGCTGTCAGCGTGAAACAGTGGCATGTTATGTGGGTTGCAAGTGTTGTACTTTTAATGGCAGCATTTACGTGGTGA 780 0.5359 MVMMKSLPLLLIVLFSHSTTTLAQSPAAAPTAPATPSTAAAPAPAPSAPPTDIIRILKKAGGFTTLIRLLQATQVSNQINSQLLTTSGGLTLFAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPTYVSVSNFDTLSNPVRTQAGENPDRLALNITSSGGNQVNMTTGVVNVTLGGTVYTDHQLAVYQVDKVLLPRDFFEAKPPAPAPAPEKAKGSKKKSVDSTATPADDAESDAVSVKQWHVMWVASVVLLMAAFTW* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1528 259 Pfam Fasciclin domain 62 196 IPR000782 -
Gso11g1528 259 MobiDBLite consensus disorder prediction 26 47 - -
Gso11g1528 259 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 253 IPR045003 -
Gso11g1528 259 SMART fasc_3 91 197 IPR000782 -
Gso11g1528 259 MobiDBLite consensus disorder prediction 204 234 - -
Gso11g1528 259 Gene3D FAS1 domain 27 197 IPR036378 -
Gso11g1528 259 SUPERFAMILY FAS1 domain 31 197 IPR036378 -
Gso11g1528 259 ProSiteProfiles FAS1/BIgH3 domain profile. 50 194 IPR000782 -
Gso11g1528 259 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1528 Gso-Chr11 17780948 17782157 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1528 - - gmx:100818760 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1528 11 17780948 17782157 Gso11g1528 11 17780948 17782157 ECH
Gso12g0568 12 5114822 5116157 Gso11g1528 11 17780948 17782157 GST