Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0565 ATGGGTGGAAGAAAGTGGAGCATCTTGGTGGCCATCTTCATCTTACTTCTTGCTATGGAAGCTGTCATTGCTCAAGGTCAAGGAAATGGAAATGGTAATGGTAATGGTAATGGTAATGGCAAGGATAAGGATAAGGAAGAGAAGGAGAGGGAGAAGAAGGAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGAAAAAGAGAAAAAGGACAAAAAGCAACGTGATGAAGCCACAAATTATGACAAGCTGTCATCTCTGCCAACCGGCCAAGAAAGAGGGTTCTGCCGAACAAACACTACCTGTGAGTTTAAGACCATCGTGTGTCCATCCGAGTGCGCATCCAGAAAGCCCAAGAAGAACAAGAAGCAGAAGGCATGTTTCATTGACTGCAGCAGCAGCACATGTGAAGCCACTTGCAAGGTTAGAAAAGCCAACTGTGATGGATATGGTGCTTTGTGTTATGATCCTCGTTTTGTTGGTGGCGATGGTGTGATGTTCTACTTCCATGGTGCCAAAGGAGGAAACTTTGCCATTGTTTCTGATGATGAGTTCCAAATCAATGCTCACTTCATTGGTACTCGACCACAAGGAAGGACTCGTGACTACACATGGGTGCAAGCACTTGCTGTCATGTTTGACACACATACTCTTGTCATTGCAGCTAATAGAGTGTCTCATTGGGATGACAAGGTTGACTCTCTCATAGTAAAGTGGGATGATGAGCTAGTGAACATTCCCACTGATGGAGAGGCTGAATGGAGGATCAATGGTGATGAAAGAGAAGTGGTTGTGGAGAGAACTGATGGTACCAACAGTGTGAGAGTGACAGTTTCAGGTTTGGTTGAGATGGACATTAGTGTGAAGCCAATTGGAGAGCAAGAAAACAAGGTTCACAATTACCAGTTGCCATCAGATGATGCTTTTGCACATTTGGAGACACAATTCAAGTTTAAGAAAAGTACAGATAATTTTGAAGGAGTTTTGGGTCAAACTTACAGGCCAGGGTATGTTAGCCCTGTCAAAAGAGGGGTTCCTATGCCAATGATGGGTGGAGAGGACAAGTACCAGACTCTCTCTCTTTTCTCAACATCATGTAACCTATGCAAGTTTCATAGGCCATCTGAGATAGCAAGCATTGAAGGACTAGTTGCTCAGTACTGA 1158 0.4387 MGGRKWSILVAIFILLLAMEAVIAQGQGNGNGNGNGNGNGKDKDKEEKEREKKEKKEKEKEKKEKEKKDKKQRDEATNYDKLSSLPTGQERGFCRTNTTCEFKTIVCPSECASRKPKKNKKQKACFIDCSSSTCEATCKVRKANCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALAVMFDTHTLVIAANRVSHWDDKVDSLIVKWDDELVNIPTDGEAEWRINGDEREVVVERTDGTNSVRVTVSGLVEMDISVKPIGEQENKVHNYQLPSDDAFAHLETQFKFKKSTDNFEGVLGQTYRPGYVSPVKRGVPMPMMGGEDKYQTLSLFSTSCNLCKFHRPSEIASIEGLVAQY* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0565 385 Pfam Root cap 313 369 IPR009646 -
Gso12g0565 385 MobiDBLite consensus disorder prediction 39 78 - -
Gso12g0565 385 Coils Coil 41 75 - -
Gso12g0565 385 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 1 375 - -
Gso12g0565 385 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 375 - -
Gso12g0565 385 MobiDBLite consensus disorder prediction 27 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0565 Gso-Chr12 5078749 5080671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0565 - - gmx:100789697 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0565 12 5078749 5080671 Gso11g1524 11 17738410 17740381 GST