Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1524 ATGGCGAAGATGGGTGGAAGAAAGTGGAGCATCTTGGTGGCCATCCTCATCTTACTTCTTGCTATGGAAGCTGTCATTGCTCAAGGTCAAGGAAATGGTAATGGCAACAATAGCAATGGCAATGGTAATGGTAATGGAAAGGGTAAGGATAAGGAAGAAAAGGAGAGGGAGAAGAGGGAGAAGGAGAAGGAGAAGAGGGAGAAGAAGGAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGAAAAAGAGAAACAGGCAAAAAAGCAGCAAGGTGAAGCCACAAATTATGACAAGCTGTCACCTCTGCCAACAGGTCAAGAACGAGGCTTCTGCAGAAAAAACACTGCCTGTGAGTTTAAGACCATTGTGTGTCCATCCGAGTGCGCATTCAGGAAGCCTAAGAAAAACAAGAAGCAGAAGGCATGTTTCATTGACTGCAGCAGCAGCACATGTGAAGCCACTTGCAAGGTTAGGAAAGCCAATTGTGATGGGTATGGATCTCTGTGTTATGATCCTCGCTTTGTTGGTGGCGACGGTGTGATGTTCTACTTCCACGGTGCCAAAGGAGGAAACTTTGCCATTGTTTCTGATAACGAGTTCCAAATCAATGCTCACTTCATTGGTACTCGACCACAAGGAAGGACTCGTGACTACACATGGGTGCAAGCACTTGCTGTCATGTTTGACACACACACTCTTGTCATTGCAGCCAATAGAGTGTCTCACTGGGATGACAAGGTTGACTCTCTCATAGTGAAATGGGATGATGAACCAGTCAACATTCCCACTGATGGAGAGGCTGAATGGAGGGCCAATGGTGATGAAAGAGAAGTGGTTGTGGAGAGAACTGATGATACCAACAGCGTGAGAGTCACAATTTCAGGCTTGGTTGAGTTGGATATTAGTGTGAAGCCAATTGGAGAGCAAGAAAACAAGATTCACAATTACCAGTTGCCATCAGATGATGCTTTTGCTCATTTGGAGACACAGTTCAGGTTTAAGAAAAGTACTGATAACTTTGAAGGAGTTTTAGGTCAGACTTATAGGCCAGGGTATGTTAGCCCTGTTAAGAGAGGGGTTCCTATGCCAATGATGGGTGGGGAGAACAAGTACCAGACTCTTTCTCTCTTTTCTACATCATGCAACCTATGCAGGTTCCAAAGGCCATCCGAAATAGCAAGCACCGAAGGACTAGTTGCTCAGTACTGA 1206 0.4519 MAKMGGRKWSILVAILILLLAMEAVIAQGQGNGNGNNSNGNGNGNGKGKDKEEKEREKREKEKEKREKKEKKEKEKEKKEKEKQAKKQQGEATNYDKLSPLPTGQERGFCRKNTACEFKTIVCPSECAFRKPKKNKKQKACFIDCSSSTCEATCKVRKANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDNEFQINAHFIGTRPQGRTRDYTWVQALAVMFDTHTLVIAANRVSHWDDKVDSLIVKWDDEPVNIPTDGEAEWRANGDEREVVVERTDDTNSVRVTISGLVELDISVKPIGEQENKIHNYQLPSDDAFAHLETQFRFKKSTDNFEGVLGQTYRPGYVSPVKRGVPMPMMGGENKYQTLSLFSTSCNLCRFQRPSEIASTEGLVAQY* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1524 401 Coils Coil 47 92 - -
Gso11g1524 401 MobiDBLite consensus disorder prediction 31 45 - -
Gso11g1524 401 MobiDBLite consensus disorder prediction 46 90 - -
Gso11g1524 401 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 4 391 - -
Gso11g1524 401 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 4 391 - -
Gso11g1524 401 MobiDBLite consensus disorder prediction 31 100 - -
Gso11g1524 401 Pfam Root cap 329 385 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1524 Gso-Chr11 17738410 17740381 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1524 - - gmx:100817693 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1524 11 17738410 17740381 Gso11g1524 11 17738410 17740381 ECH
Gso12g0565 12 5078749 5080671 Gso11g1524 11 17738410 17740381 GST