Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0563 ATGACAAAGAGAATACGTAAGGATTGTTCCTTGCAGGAGGATGTAGAGAAAGTGAATAATAGCTTTGTTGAATTGGATACAAGGGAAGGAATGAATGATGGTTTTCCTAGAGCTGGACCAAATGATTCGCTTCTTCCTGGTCTTTTTGATGATGTTGCGCTGAATTGTCTTGCTTGGGCTAGTAGATCTGATTATGCTTCACTAGCATGTATAAATAAAAGGTACAACTTGCTGATTAGGAGCGGGTATCTATCTGAGTTGAGGAAGAAGCTGGGGATTGTGGAGCTAGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGGTGGGAGGTATTTGACCCCAAGAAGAATAGATGGATAACATTACCTAAGATACCTTGTGATGAGTGTTTTAATCATGCAGACAAGGAGTCCTTGGCTGTGGGGAGTGAAATGCTGGTTTTTGGTCGGGAATTGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTCTTGCAATTGGGTGAAGTGTAAGGAGATGAACCGTCCTCGCTGCTTGTTCGGATCTGGCAATCTTGGTTCAATTGCTATTGTTGCTGGTGGAAGTGATAAATATGGAAATGTTCTTGAATCGGCAGAGTTGTATGACTCAAATTCAGGTACATGGGAACTATTGCCAAACATGCATACACCACGTAGATTGTGCTCTGGTTTTTTTATGGATGGCAAATTCTATGTGATTGGTGGCATGTCAAGTCCTATTGTTTCATTGACTTGTGGGGAGGAGTATGATCTTAAGACTAGAAATTGGCGGAAAATAGAGGGTATGTACCCATATGTTAATGGGGCTGCTCAGGCACCTCCACTTGTGGCAGTTGTGGATAACCAGTTGTATGCCGTTGAGCATCTAACCAACATGGTGAATAAATATGACAAGGAAAGGAACACCTGGAGTGAATTGGGAAGACTTCCAGTACGGGCTGATTCTTCTAATGGATGGGGCCTGGCTTTCAAGGCTTGTGGGGAGAAACTTCTGGTTGTGAGTGGACAAAGGGGTCCAGAAGGTGAAGCTGTTGTGCTGAATTCATGGCGTCCTAGGACAGGGTTCAGGAATGGAACCATAGATTGGAAAGTACTTGGTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGATGGTCCGGTGAGATGCTTTTAGATTGA 1194 0.433 MTKRIRKDCSLQEDVEKVNNSFVELDTREGMNDGFPRAGPNDSLLPGLFDDVALNCLAWASRSDYASLACINKRYNLLIRSGYLSELRKKLGIVELEHLVYLVCDPRGWEVFDPKKNRWITLPKIPCDECFNHADKESLAVGSEMLVFGRELMDFAIWKYSLISCNWVKCKEMNRPRCLFGSGNLGSIAIVAGGSDKYGNVLESAELYDSNSGTWELLPNMHTPRRLCSGFFMDGKFYVIGGMSSPIVSLTCGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVNKYDKERNTWSELGRLPVRADSSNGWGLAFKACGEKLLVVSGQRGPEGEAVVLNSWRPRTGFRNGTIDWKVLGVKEHVGVFVYNCAVMGWSGEMLLD* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0563 397 Pfam Kelch motif 224 269 IPR006652 GO:0005515
Gso12g0563 397 Pfam Kelch motif 176 221 IPR006652 GO:0005515
Gso12g0563 397 Gene3D - 99 377 IPR015915 GO:0005515
Gso12g0563 397 SMART kelc_smart 236 288 IPR006652 GO:0005515
Gso12g0563 397 SMART kelc_smart 188 235 IPR006652 GO:0005515
Gso12g0563 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 34 389 - -
Gso12g0563 397 SUPERFAMILY Kelch motif 108 345 IPR015915 GO:0005515
Gso12g0563 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 34 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0563 Gso-Chr12 5060682 5063008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0563 48 267 Miscellaneous Gene Families AT4G33900 26.364 6.28e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0563 - - gmx:100778680 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0563 12 5060682 5063008 Gso11g1521 11 17714109 17716414 GST