Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1521 ATGACAAAGAAAATACGTTTGGATTGTTCCTTGCAGGAGGATGAAGAGAAAGTGAATAATAGCTTTGTTGAATTGGATACAAGGGAAGGAGTGAATGATGGTTTTCCTAGAGTTGGACCAAATGATTCGCTTCTTCCTGGTCTTTTTGATGATGTTGCGCTGAATTGTCTTGCTTGGGTTAATAGATCGGATTATGCTTCACTAGCATGTATAAATAAAAGGTACAACTTGCTGATTAGGAGCGGGTATCTATTTGAGTTGAGGAAGAAGTTGGGGATTGTGGAGCTAGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGGTGGGAGGTGTTTGACCCCAAGAGGAATAGATGGATAACATTACCTAAGATACCTTGTGATGAGTGCTTTAATCATGCAGACAAGGAGTCCTTGGCTGTGGGGAGTGAATTGTTGGTTTTTGGTCGGGAAATGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTCTCGTGGTTGGGTTAAGTGTAAGGAGATGAACCATCCTCGCTGCTTGTTCGGATCTGGCAGTCTTGGTTCAATTGCTATTGTTGCTGGTGGAAGTGATAAATATGGAAATGTTCTTGAATCAGCAGAGTTGTATGACTCAAATTCAGGTACATGGAAACTATTGCCAAACATGCATACACCACGAAGATTGTGCTCTGGCTTTTTTATGGATGGAAAATTCTATGTGATTGGTGGCATGTCAAGTCCTACGGTTTCATTGACTTGTGGGGAGGAGTATGACCTTAAGACGAGAAACTGGCGGAAAATAGAGCGTATGTATCCATATGTTAATGGGGCTGCTCAGGCACCTCCACTTGTGGCAGTTGTGGATAACCAGTTGTATGCGGTTGAGCATCTAACCAACATGGTGAGGAAATATGACAAGGAAAGGAACACCTGGAGTGAATTGGGAAGGCTTCCAGTACGTGCCGATTCTTCTAATGGATGGGGCCTGGCTTTCAAGGCTTGTGGAGAGAAACTTCTGGTTGTGAGTGGACAAAGGAGTCCAGAAGGTGAAGCTGTTGTACTGAATTCATGGTGTCCTAGGACAGGAGTCAGGAATGGAACCATAGATTGGCAAGTACTTGGTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGATGGTTTGGTGAAGTGCTTTTAGATTGA 1194 0.4322 MTKKIRLDCSLQEDEEKVNNSFVELDTREGVNDGFPRVGPNDSLLPGLFDDVALNCLAWVNRSDYASLACINKRYNLLIRSGYLFELRKKLGIVELEHLVYLVCDPRGWEVFDPKRNRWITLPKIPCDECFNHADKESLAVGSELLVFGREMMDFAIWKYSLISRGWVKCKEMNHPRCLFGSGSLGSIAIVAGGSDKYGNVLESAELYDSNSGTWKLLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDLKTRNWRKIERMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVRKYDKERNTWSELGRLPVRADSSNGWGLAFKACGEKLLVVSGQRSPEGEAVVLNSWCPRTGVRNGTIDWQVLGVKEHVGVFVYNCAVMGWFGEVLLD* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1521 397 Gene3D - 100 371 IPR015915 GO:0005515
Gso11g1521 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 34 389 - -
Gso11g1521 397 Pfam Kelch motif 224 269 IPR006652 GO:0005515
Gso11g1521 397 Pfam Kelch motif 176 221 IPR006652 GO:0005515
Gso11g1521 397 SUPERFAMILY Kelch motif 108 347 IPR015915 GO:0005515
Gso11g1521 397 SMART kelc_smart 188 235 IPR006652 GO:0005515
Gso11g1521 397 SMART kelc_smart 236 288 IPR006652 GO:0005515
Gso11g1521 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 34 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1521 Gso-Chr11 17714109 17716414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1521 48 267 Miscellaneous Gene Families AT4G33900 25.909 3.55e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1521 - - gmx:100792139 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1521 11 17714109 17716414 Gso11g1521 11 17714109 17716414 ECH
Gso12g0563 12 5060682 5063008 Gso11g1521 11 17714109 17716414 GST