Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0559 ATGGAGCAGAGCATTGGTGAACGCAGGTTAGCATACGATGAATGTTTCTACGCAAGGACTGCTTATCCTCAACGCTCGCTTCTCTTCCAATTTCTCCTTCCGAGGTTGTCGGTTTTTCCACCTTCGCAACAGTGTGAAGGGCCGAGAAGGGGTTTCTCTAAAAACATGTCTTGCAGTGTCAGTGTGGATAATTCTGATATGGTTCATCCAGCCACAGATGCTTATGCTGGAGAGGCAGTTGAAGCTTTGAAAGCTGGCTCATTGGAAGCAGTTAACAGAATTTACGAGATTAAAGGCCGTAGACATACAAGCCCTCTGGCTATTTGTGTTGGTGATGTATCAGATATAGCCCGTTTTGCTGTCACTGACCATTTACCTCATGGTCTGCTTGATTGCCTCCTACCTGGGCCTGTTATAGTTGTACTAAAACGTGGAGTCAAGTATTCTTGA 450 0.4556 MEQSIGERRLAYDECFYARTAYPQRSLLFQFLLPRLSVFPPSQQCEGPRRGFSKNMSCSVSVDNSDMVHPATDAYAGEAVEALKAGSLEAVNRIYEIKGRRHTSPLAICVGDVSDIARFAVTDHLPHGLLDCLLPGPVIVVLKRGVKYS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0559 149 Pfam Telomere recombination 85 144 IPR006070 GO:0003725
Gso12g0559 149 PANTHER SUA5 37 145 - -
Gso12g0559 149 Gene3D DHBP synthase 61 149 - -
Gso12g0559 149 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 37 145 - -
Gso12g0559 149 SUPERFAMILY YrdC/RibB 78 144 IPR017945 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0559 Gso-Chr12 5016679 5019775 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0559 K07566 - gsj:114379141 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0559 12 5016679 5019775 Gso11g1516 11 17676997 17679558 GST