Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0550 ATGGCGGAAACAACCTCTGCTTCTGTTTCTTCTCCTGCGGGTGATTCTAATTGGAGAGAGAACAAGTTGTGGAAAGGCACATTTGCTGTCGCAGGAATCATGCTCACCCTCGTTACCTATGGTGTTTTGCAGGAAAAGATCATGAGAGTTCCTTATGGGGTGAACAAGGACTACTTCAAATATTCTCTTTTTCTTGTTTTCTGCAATCGCATCACGACATCTGCTGTTTCAGCTGGTGCTTTACTGGCAAGTAAAAAGGCATTGGATCCTGTAGCTCCCATTTATAAGTATTGCCTTGTGTCGGTATCAAACATACTTACCACAAGTTGTCAGTATGAGGCCCTCAAATATGTTAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTTATGGTCTGGGGCACTGCCATAATGCAGAAGAGATATCGGGGAACTGACTATTTGTTGGCCTTTGTAGTAACCCTTGGCTGCTCAGTGTTCATCCTGTATCCGGCAGGGACCGACATAAGTCCATACGGTAGAGGAAGAGAAAATACTGTTTGGGGCGTTTTGCTAATGCTTGGTTATCTTGGGTGTGATGGCTTTACAAGTACATTCCAAGATAAGATGTTTAAAGGCTATAACATGGAGATACATAATCAGATATTCTATACTACTTTGTGTTCTTGTATTCTTAGCCTGGCAGGTCTTATCATACAAGGACATTTATTACCAGCTGTAGAGTTCGTTTATATCCATAAAGATTGCTTTTTTGACATTGCATTGCTTTCAACTGTTGCGACAGCTAGTCAATTTTTTATTTCCTACACAATTCGCACATTTGGTGCTCTAACATTTGCTACTATAATGACAACAAGACAGTTGGTAAGCATCTTGCTGTCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTAATTGTCTTTGGCGCGATTTATGCAAAAAGCTTCTTGAGGAAAGCACCTGAAAAGACAACCTCTTCTGTAGAACATGTACAAAATGGAAATTCAAATAATTTGAAGGAGAATCCATGA 1062 0.4096 MAETTSASVSSPAGDSNWRENKLWKGTFAVAGIMLTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALLASKKALDPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTAIMQKRYRGTDYLLAFVVTLGCSVFILYPAGTDISPYGRGRENTVWGVLLMLGYLGCDGFTSTFQDKMFKGYNMEIHNQIFYTTLCSCILSLAGLIIQGHLLPAVEFVYIHKDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSILLSCVWFAHPLSWEQWIGAVIVFGAIYAKSFLRKAPEKTTSSVEHVQNGNSNNLKENP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0550 353 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 18 337 IPR013657 GO:0055085
Gso12g0550 353 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 18 337 - -
Gso12g0550 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 323 - -
Gso12g0550 353 Pfam UAA transporter family 27 325 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0550 Gso-Chr12 4926985 4932393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0550 19 335 Organic Solute Cotransporters AT5G59740 82.019 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0550 K15276 - gmx:100782423 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0550 12 4926985 4932393 Gso11g1215 11 10978236 10990911 GST
Gso15g0366 15 3276791 3283267 Gso12g0550 12 4926985 4932393 PCT
Gso11g3439 11 50344322 50349635 Gso12g0550 12 4926985 4932393 PCT
Gso12g0550 12 4926985 4932393 Gso15g0366 15 3276791 3283267 PCT
Gso12g0550 12 4926985 4932393 Gso11g3439 11 50344322 50349635 PCT