Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3439 ATGGCGGAATCATCCACTAGTTCTCCTGTTTCAGTTGATTCCATTCCCAGAGACAATGATAAGTTCTGGAAAGGGTCATTTACTGTCGCCGGAATCATGGAAAAGATCATGAGAGTGCCGTATGGGACAGAAAAGGAGTATTTCAAGCATTCACTGTTTCTTGTTTTCTGCAACCGCATCACAACATCTGCTGTTTCTGCTGGTTCTTTGCTGGCAAGTAAAAAAGTGTTGGACCCGGTAGCTCCCATTTATAAGTACTGCCTTATCTCGGTTTCAAACATACTAACTACAACTTGCCAGTATGAGGCCCTCAAATATGTTAGTTTTCCTGTTCAGACCCTTGCAAAATGTGCAAAAATGATACCAGTTATGGTCTGGGGTGCCCTCATTATGCAGAAGAGATACCAGGGACCTGACTATTTGTTGGCTTTTTTAGTTACCCTTGGCTGCTCAGCATTTATCCTATATCCGGCAGGAACAGACATGAGTCCTTACAGTAGAGGAAGGGAAAATACAGTTTGGGGCATTCTCCTAATGGTTGGCTATCTTGGGTTTGATGGATTTACAAGCACATTCCAAGATAAGTTGTTTAGAGGCTATGACATGGAGATACATAATCAGATATTTTACACAACATTGTGCTCTTGTGTTCTTAGCCTGACAGGTCTTATCTTACAAGGACATTTAATACCAGCTATAGAATTTGTTTATCACCATCATGATTGTTTCTTTGACATAGCATTGCTTTCGACTGTTGCCACAATTAGTCAATTTTTTATTTCATACACAATTCGCACCTTCGGTGCTCTGACATTTGCAACCATAATGACCACAAGACAGTTGGTGAGCATTATGCTGTCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTCATTGTCTTTGGCTCCCTTTATGGAAAAAGCTTCTCGAGGAAAATGCCTCAGAAGACAACCCCCTCTATAGCACTTGTTCAAAATGGGGATCCAAATAATTTGAAGGACAATCTGTGA 1029 0.415 MAESSTSSPVSVDSIPRDNDKFWKGSFTVAGIMEKIMRVPYGTEKEYFKHSLFLVFCNRITTSAVSAGSLLASKKVLDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGALIMQKRYQGPDYLLAFLVTLGCSAFILYPAGTDMSPYSRGRENTVWGILLMVGYLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCVLSLTGLILQGHLIPAIEFVYHHHDCFFDIALLSTVATISQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWIGAVIVFGSLYGKSFSRKMPQKTTPSIALVQNGDPNNLKDNL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3439 342 Pfam UAA transporter family 33 314 IPR013657 GO:0055085
Gso11g3439 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 315 - -
Gso11g3439 342 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 17 326 - -
Gso11g3439 342 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 17 326 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3439 Gso-Chr11 50344322 50349635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3439 7 331 Organic Solute Cotransporters AT5G59740 76.261 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3439 K15276 - gmx:100782989 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0366 15 3276791 3283267 Gso11g3439 11 50344322 50349635 GST
Gso11g3439 11 50344322 50349635 Gso12g0550 12 4926985 4932393 PCT
Gso11g3439 11 50344322 50349635 Gso11g1215 11 10978236 10990911 PCT
Gso12g0550 12 4926985 4932393 Gso11g3439 11 50344322 50349635 PCT
Gso11g1215 11 10978236 10990911 Gso11g3439 11 50344322 50349635 PCT