Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0548 ATGGAAGACCTGGATTCGGTGTTCGTTTACCACGAGGGAGAACACGAGTTAAGGCAGAAACTTATGAATGCCAGACATGAACTTGAGAAAATGAAAAATGTCAAGGCAGAATTGCTTGATCTGTTGAACATGGCATACCAAGAGAGGGATGAAGCAAGGTGTCAGTTACAGAAGCTGATGAATCCATTCATGCCCTCTAATCCAACCCATTTGCAAAACGTGTTTGATAGCCAAAGTCATCTCATGTTCCCTTCTGCTAAGGCAAACTCAAGCATAACAGAATCTGACAATAGTCTCTCACACGGTTCCTCACAAGTGGATTCCTTTTTTGACACAGTCTCTTCTCCAGAGTTTACAAATGTCAATGCAGTTGACCCTATTAACATAATGAGTTATCTCAACCAGCATGTGGTTCTTCAGGACTTCAATTTCTCAGCACCGCATGCTTTGATGGTTCCTTCAGAAAAGCCAATGTGTGACACTGCCGATGCAGTTATAGATTGTCTTGCCAAAGACAGAGGTTTTCCCCAAAAGGGTAAATTCGTTCAGGCTGTGATGGATGCCGGTCCATTGCTCAAAACATTGCTCCTTGCAGGGCCACTTCCTAAATGGAGAAACCCCCCTCCTTTACAAAACATCAAAGTTCCACCTCTTACCATAAAAAAATGTGATGTCAATAGCATTGTGCCTAATACTTTTGGAGACACTGGAAATACGCTTCTGAAACCGCAGCTTCCAGCCTTGCATTATTTAAATGCTACCTTCACGTGTTCAGCTTCTATGCTTAACTTTGCTGGTCAAACCAATGGTTCATCGTACAATACATCGCAGTTGAATTCAACTCCTGGTGTCAGCATCCAAGTCCCTTCAAGCAAGCGTCTGAGGCATCAATGA 894 0.4306 MEDLDSVFVYHEGEHELRQKLMNARHELEKMKNVKAELLDLLNMAYQERDEARCQLQKLMNPFMPSNPTHLQNVFDSQSHLMFPSAKANSSITESDNSLSHGSSQVDSFFDTVSSPEFTNVNAVDPINIMSYLNQHVVLQDFNFSAPHALMVPSEKPMCDTADAVIDCLAKDRGFPQKGKFVQAVMDAGPLLKTLLLAGPLPKWRNPPPLQNIKVPPLTIKKCDVNSIVPNTFGDTGNTLLKPQLPALHYLNATFTCSASMLNFAGQTNGSSYNTSQLNSTPGVSIQVPSSKRLRHQ* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0548 297 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 297 - -
Gso12g0548 297 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 297 IPR012862 -
Gso12g0548 297 MobiDBLite consensus disorder prediction 274 291 - -
Gso12g0548 297 Pfam Protein of unknown function (DUF1635) 15 224 IPR012862 -
Gso12g0548 297 Coils Coil 14 48 - -
Gso12g0548 297 MobiDBLite consensus disorder prediction 274 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0548 Gso-Chr12 4920617 4923198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0548 - - gmx:100776018 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0548 12 4920617 4923198 Gso11g1212 11 10969674 10972155 GST
Gso15g0363 15 3264779 3269604 Gso12g0548 12 4920617 4923198 PCT
Gso11g3442 11 50358202 50360464 Gso12g0548 12 4920617 4923198 PCT
Gso12g0548 12 4920617 4923198 Gso15g0363 15 3264779 3269604 PCT
Gso12g0548 12 4920617 4923198 Gso11g3442 11 50358202 50360464 PCT