Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3442 ATGGAAAATCACTCGGATTCCATATTCAGTTATCACGAGAGTTGTGATGAGTTGAGGCAAAAGCTTTTGGCCACCACACTGGAACTGAAGACCATGGAGAACGTGAAGAGGGAACTGTTGAATCTGCTGAAGATGGCATACCAAGAGAGAGACGAAGCAAGAGAAGAGCTTCAAAAACTCGAAGCAAGAGAAGAGCTTCAAAAACTCGTTACAAAACTAACACCCTCGATTTTGTTCGAAGTTCCTTCCATGATGATGATTCATGCGCAAACCAAGGCAAACTCGAGCATCACCGAATCCAACAGCACCTCGCACGTTTCCTCCTCCGTAGATTCCCTTCTCGAGGCATTTTCTCCTCAGGAATTCTCCAACATGAACAACAACAACATTGTCGAGTCCCACAACTTGGGTGGTTATTATCTGAAACAACCTTCTGTTCAAAACATGAACATGAGTGTCTTGTCTCAAAAGCGCACGTGTGATGCTGGGGACCAAGTGATTGAATACATGGCTAAGGGAAAAGTGTTGCCTCAAAAGGGTAATCTCCTTAAGGCTGTGATGGACGCGGGTCCTGTGCTTCAGACACTCCATGTTGCGGGGCCACTTCCCACGTGGCGAAATCCCCCTCCTTTGCAGAACATAAAGATTCCACCTCTCAATGTTCAAGACTTTGTTGCTTCCAATAATAATAATAATGTGAATACACTTCGGAAGCCAATGCTTGCACCCTCTCATTATTCTACACAGCCTTCCATGCTCAACAATTCATTCCAGATGGCTTCAAATGCTAATTGCAAAAACCTTGCACCATCGAGGATTCCACAAAGCAATCAGCATCTTCTACGAAACTAG 852 0.4472 MENHSDSIFSYHESCDELRQKLLATTLELKTMENVKRELLNLLKMAYQERDEAREELQKLEAREELQKLVTKLTPSILFEVPSMMMIHAQTKANSSITESNSTSHVSSSVDSLLEAFSPQEFSNMNNNNIVESHNLGGYYLKQPSVQNMNMSVLSQKRTCDAGDQVIEYMAKGKVLPQKGNLLKAVMDAGPVLQTLHVAGPLPTWRNPPPLQNIKIPPLNVQDFVASNNNNNVNTLRKPMLAPSHYSTQPSMLNNSFQMASNANCKNLAPSRIPQSNQHLLRN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3442 283 Coils Coil 15 70 - -
Gso11g3442 283 Pfam Protein of unknown function (DUF1635) 13 255 IPR012862 -
Gso11g3442 283 PANTHER HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED 1 268 - -
Gso11g3442 283 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 268 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3442 Gso-Chr11 50358202 50360464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3442 - - gmx:100784063 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0363 15 3264779 3269604 Gso11g3442 11 50358202 50360464 GST
Gso11g3442 11 50358202 50360464 Gso12g0548 12 4920617 4923198 PCT
Gso11g3442 11 50358202 50360464 Gso11g1212 11 10969674 10972155 PCT
Gso12g0548 12 4920617 4923198 Gso11g3442 11 50358202 50360464 PCT
Gso11g1212 11 10969674 10972155 Gso11g3442 11 50358202 50360464 PCT