Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0517 ATGTGGCGAGAATGTGTTTGGCTTGCGAATGAATTGTGGCGTCGTGGGCTGATGGCCGGCACGAGCCTCTCTCACGTGATCCAATCGACGGTCCTAGAATTGCCCAGAACCACCCGCCACGTCAGAATCTCCGCCAAGAGCCACCGCGTCTCCGCCACCTCTGACCAACGCCCCGCGGGACCCTACTGCATCTACGTTGGCCCCCTCGAAACCGCCAACAAAGAGAACCTCGAAGCCCTTTATTGCCAAGCACGGGATGCTTATTATAGTGGTCAACCTCTGATAGTTGATGACATGTTTGATAGAGTAGAGTTAAGGCTAAGATGGTTTGGTTCAAAGTCAGTTGTAAAGTATCCTCGGTGCAGTATTAGGAGGCAATCCACATTTGCTGATGCTGAGGAAGATCTGTCTATGGTTTTTGCATTAGCAAGCACATGGGCCATGTTCCTTGCATTTGGCAGTTTAGCCTGTGTTGGTCCCGTATCATACACTGTTGGCATGGCTTATCAAAATGCATTCGATTCAGGCTTATCACTTGGTAGCCAAACACCTGGACTAGGGTTTCTGGCCGTGGTGAACAGCCTTATTTTCGTTGGGCTGGGTTTTGTGATCGGCTACCCTGTTGCTTCAGCTTCAGCTAAGGTGCTTCAAGGCCTTTGGAGGAATGACTTGGTGGCACTAAAAGGTGCATGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGAGAATGGACAGGAATATTGAGTCACCTCACAGAGCAGATTGTCATGTGTGTGAATGCATATTAGAATTTCGCACAAAAGTTGAGCAATCAGTCTCAAGATTTGGTAGACAGTGGGTTTATGGGCGTATTTATCTTGTTTCATTAAGAGGCAGATCCCGACGTAAATAA 894 0.4799 MWRECVWLANELWRRGLMAGTSLSHVIQSTVLELPRTTRHVRISAKSHRVSATSDQRPAGPYCIYVGPLETANKENLEALYCQARDAYYSGQPLIVDDMFDRVELRLRWFGSKSVVKYPRCSIRRQSTFADAEEDLSMVFALASTWAMFLAFGSLACVGPVSYTVGMAYQNAFDSGLSLGSQTPGLGFLAVVNSLIFVGLGFVIGYPVASASAKVLQGLWRNDLVALKGACPNCGEEVFAFVRMDRNIESPHRADCHVCECILEFRTKVEQSVSRFGRQWVYGRIYLVSLRGRSRRK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0517 297 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 25 294 IPR039987 GO:0009535|GO:0009773|GO:0016730
Gso12g0517 297 PANTHER PGR5-LIKE A PROTEIN 25 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0517 Gso-Chr12 4609414 4612417 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0517 - - gmx:100810752 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0331 15 2981533 2983764 Gso12g0517 12 4609414 4612417 PCT
Gso11g3478 11 50676826 50680134 Gso12g0517 12 4609414 4612417 PCT
Gso12g0517 12 4609414 4612417 Gso15g0331 15 2981533 2983764 PCT
Gso12g0517 12 4609414 4612417 Gso11g3478 11 50676826 50680134 PCT