Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3478 ATGAAAGTGAAGGTGATGAGAGTCGCGAGCAGCAGCAGCAGCAACGGGTTGAGCGTGGTAGCCAAAATGAGAAGAAGCAGCAGCGTTTCTTTGTTCTCCGTTCGAGCCTGCCATGATCTCCCTCATGGACCTTCCTGCATCTACGTTGGCCCCCTCCACTCCGCAACCCAAGAGACCCTCGAAGCTCTTTACTCTCAGGCACGGGATGCATATTACAGCGGAGAGCCTTTGATTCTTGATGACATGTTTGATAGACTAGAGTTGAAGCTTAAGTGGTATGGTTCTAAGTCAGTTGTCAAGTATCCCAGATGCAGTATCAGAAGGCATTCAACATATGCTGATGCTGACGAAGATCTGTCAATGGCTATTGCATTAGCAAGCTTATGGTCCCTATTTCTCGCACTTGGCTGTTCAGCGTGTGTTTCGCCCATATTCTACACTGTTAGCACGGCTTATCACAGAGCATTCGACTCAGGATTATCATACGGTAGCCCATCTTCATCGGGACTAGGGCTTCTTTTTGTCGTCAATAGCATTATCTTCATGGCACTGGGTTTCGTCATTGGCTACCCAGTTGCTTCAGCTTCAGTTAAGGTACTTCAAGGTTTGTGGAGGAATGATTTAGCGGCACTAAAGGGTTCTTGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGAGAACGGACAAGGCTAACAACTCTCCCCATAGAGCAGATTGTCATGTGTGTGAATGCTTATTGGAATTTCGCACCGAAGTTGAGCAATCGGCTTTAAGATTAGGGAGACAATGGGTTTATGGGCGTATTTACCTTGTTCGCAGATCCAGACGCCAAAGAGAACCGTAA 846 0.4681 MKVKVMRVASSSSSNGLSVVAKMRRSSSVSLFSVRACHDLPHGPSCIYVGPLHSATQETLEALYSQARDAYYSGEPLILDDMFDRLELKLKWYGSKSVVKYPRCSIRRHSTYADADEDLSMAIALASLWSLFLALGCSACVSPIFYTVSTAYHRAFDSGLSYGSPSSSGLGLLFVVNSIIFMALGFVIGYPVASASVKVLQGLWRNDLAALKGSCPNCGEEVFAFVRTDKANNSPHRADCHVCECLLEFRTEVEQSALRLGRQWVYGRIYLVRRSRRQREP* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3478 281 PANTHER PGR5-LIKE A PROTEIN 12 279 - -
Gso11g3478 281 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 12 279 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3478 Gso-Chr11 50676826 50680134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3478 - - gmx:100791480 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0331 15 2981533 2983764 Gso11g3478 11 50676826 50680134 GST
Gso11g3478 11 50676826 50680134 Gso12g0517 12 4609414 4612417 PCT
Gso12g0517 12 4609414 4612417 Gso11g3478 11 50676826 50680134 PCT