Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0503 ATGACCACAACTATTCCTTCATCACATTCATTTTTTGTGGCATTCCTCTTTGCCACCAGCTTCCTTTGGTCTTTTCCCGAATTTGCTCTCGCTACTTCAAAGCATGGAAGTGTCACAAGGCACTACAAGTTTGATATAAGGCTGAGAAACATTACGAGGCTGTGCCACACGAAGAGCATGGTTACCGTGAACGGAAAGTTCCCTGGGCCTAGAGTTGTTGCAAGAGAAGGTGACAGAATAGTGGTAAAGGTGGTTAATCATGTTCCCAACAATGTCAGCATACACTGGCATGGAGTGAGACAGCTTCAAAGTGGATGGGCAGATGGTCCATCTTACATAACTCAATGCCCCATTCAAACTGGCCAGAGTTATGTGTACAACTTCACAATTGTTGGACAAAGAGGAACCCTCTTCTGGCATGCTCACATTTCATGGTTAAGAGCCACTCTCTATGGACCCCTAATCCTCCTCCCTAGGCGCAACGAATCTTACCCATTTGAGAAACCCTACAAGGAAGTTCCCATCCTCTTTGGTGAGTGGTGGAATGCTGATCCAGAGGCTGTTATTGCACAAGCCCTTCAGACAGGGGCTGGCCCAAATGTCTCTGATGCCTACACTTTTAACGGTCTTCCTGGACCCCTCTACAATTGCTCCAACAACGAGACAGACACAGAAACCGACACGTTCAGGTTAAAGGTGAAGCCAGGGAAGACATATCTTCTTCGTTTGATCAATGCTGCACTCAATGATGAACTCTTTTTCAGCATTGCAAACCACACCTTGGTAACTGTTGAAGCTGATGCTACTTACGTTAAACCTTTCGAGTCAGAGATCATCGTAATAGGGCCAGGACAAACCTCAAACTTTCTGTTAAAGACAAAACCTGAGTACCCAAATGTCAATTTCTTGATGCTAGCAAGACCATATTTCACTGGCATGGGAACTTTCGACAATTCCACAGTTGCTGGCATTCTTGAGTACAAGAAACCGCTTGTTGCTCCAAAAAACACTATTCCCACTTTGAAACCCTCTCTTCCAGCCATCAATGACACTTCCTTCGTTGCCAACTTCAGCAGTAAATTCCTCAGTTTGAACACTGACAAGTACCCTGCAAAGGTGCCTCAAACCGTTGACAAGAGCTTCTTCTTCACAATTGGACTTGGAACAAGTCCTTGCCCCAAAAACCAAACATGCCAAGGACCAAACAACAGTTCAAAGTTTGCGGCCTCAATGAACAATATATCCTTCACTCTTCCTTCCATAGCACTTCTTCAGCAACATTTCTTCGGCCAAGCTAATAATGGCATTTACACCACTGATTTCCCTGCCATGCCACTCATGCCATTCAACTACACGGGGACCCCACCGAACAACACAAGGGTCAGTAATGGAACAAAGACTGTGGTGATACCCTTTAACACAAGGGTGCAAGTGGTGCTCCAAGACACTAGCATTTTGGGAGCTGAGAGCCACCCTTTGCACCTTCATGGCTTTAACTTCTATGTTGTGGGTCAAGGCTTTGGGAACTTTAATCCTAACACTGACCCTCCAAAATTCAACCTTGTTGACCCCGTTGAAAGGAACACTGTTGGTGTGCCCTCTGGTGGTTGGGTTGCAATCAGATTCCTTGCTGACAACCCAGGTGTTTGGCTAATGCATTGCCATTTTGATGTCCACCTTAGTTGGGGGTTGAGGATGGCTTGGATTGTTGAGGATGGGAAGCTACCTAATCAGAAGTTGCCTCCTCCACCAGCTGATCTCCCTAAGTGTTGA 1773 0.4591 MTTTIPSSHSFFVAFLFATSFLWSFPEFALATSKHGSVTRHYKFDIRLRNITRLCHTKSMVTVNGKFPGPRVVAREGDRIVVKVVNHVPNNVSIHWHGVRQLQSGWADGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHISWLRATLYGPLILLPRRNESYPFEKPYKEVPILFGEWWNADPEAVIAQALQTGAGPNVSDAYTFNGLPGPLYNCSNNETDTETDTFRLKVKPGKTYLLRLINAALNDELFFSIANHTLVTVEADATYVKPFESEIIVIGPGQTSNFLLKTKPEYPNVNFLMLARPYFTGMGTFDNSTVAGILEYKKPLVAPKNTIPTLKPSLPAINDTSFVANFSSKFLSLNTDKYPAKVPQTVDKSFFFTIGLGTSPCPKNQTCQGPNNSSKFAASMNNISFTLPSIALLQQHFFGQANNGIYTTDFPAMPLMPFNYTGTPPNNTRVSNGTKTVVIPFNTRVQVVLQDTSILGAESHPLHLHGFNFYVVGQGFGNFNPNTDPPKFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLPPPPADLPKC* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0503 590 PANTHER LACCASE 10 590 - -
Gso12g0503 590 PANTHER MULTI-COPPER OXIDASE 10 590 IPR045087 -
Gso12g0503 590 Pfam Multicopper oxidase 49 159 IPR011707 GO:0005507
Gso12g0503 590 SUPERFAMILY Cupredoxins 370 590 IPR008972 -
Gso12g0503 590 CDD CuRO_2_LCC_plant 173 327 IPR034285 -
Gso12g0503 590 ProSitePatterns Multicopper oxidases signature 2. 553 564 IPR002355 GO:0005507
Gso12g0503 590 Pfam Multicopper oxidase 452 573 IPR011706 GO:0005507|GO:0016491
Gso12g0503 590 SUPERFAMILY Cupredoxins 167 363 IPR008972 -
Gso12g0503 590 Gene3D - 170 366 IPR008972 -
Gso12g0503 590 CDD CuRO_1_LCC_plant 42 158 IPR034288 GO:0005507
Gso12g0503 590 Pfam Multicopper oxidase 172 329 IPR001117 -
Gso12g0503 590 TIGRFAM laccase: laccase 39 590 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gso12g0503 590 Gene3D - 393 590 IPR008972 -
Gso12g0503 590 SUPERFAMILY Cupredoxins 35 190 IPR008972 -
Gso12g0503 590 Gene3D - 27 157 IPR008972 -
Gso12g0503 590 ProSitePatterns Multicopper oxidases signature 1. 548 568 IPR033138 -
Gso12g0503 590 CDD CuRO_3_LCC_plant 436 573 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0503 Gso-Chr12 4472216 4476021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0503 K05909 - gmx:100811833 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0503 12 4472216 4476021 Gso11g1167 11 10471171 10475855 GST