Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1167 ATGATCAAACCTATTCCTTCATCACCTTCACTTTTTGTGGCATTCCTCTTTGCCACCAGCTTCCTTTGGTCTTTTCCCGAATTTGTTCTCGCTACTTCAAAGCATGGAAGTGCTACAAGGCACTACAAGTTTGATATAAGGTTGAGAAACGTTACGAGGCTGTGCCACACGAAGAGCATGGTTACCGTGAACGGAAAGTTCCCTGGGCCTAGAGTTGTTGCAAGAGAAGGTGACAGAATAGTGGTAAAGGTGGTTAATCATGTTCCCAACAATGTCAGCATACACTGGCATGGAGTGAGACAGCTTCAAAGTGGATGGGCAGATGGTCCATCTTACATAACTCAATGCCCGATTCAAACTGGCCAGAATTATGTGTACAACTTCACCATTGTTGGACAAAGAGGAACCTTATTCTGGCATGCTCACTTTTCATGGTTAAGAGCCACTCTCTATGGACCCCTAATCCTCCTACCTAGGCGCAACGAATCTTACCCATTTGAGAAACCCTACAAGGAAGTTCCCATCATCTTTGGTGAGTGGTGGAACGCTGATCCAGAGGCTGTTATTGCACAAGCCCTTCAGACAGGGGCTGGCCCAAATGTCTCTGATGCCTACACTTTTAACGGACTTCCTGGACCCTTTTACAATTGCTCCAATAACGAGACAGACACGGACACTTTCAGGTTAAAGGTGAAACCAGGGAAGACATATCTTCTTCGTTTGATCAATGCTGCACTCAATGATGAACTCTTTTTCAGCATTGCAAACCACACCTTGGTAACTGTTGAAGCTGATGCTACTTACGTTAAACCTTTCGAGTCAGACATCATAGTCCTGGGGCCAGGACAAACCTCAAACGTTCTGTTAAAGACAAAAGCTGAGTACCCAAATGCCAATTTCTTGATGCTAGCAAGACCATATTTCACTGGCATGGGAACTTTCGACAATTCCACAGTTGCTGGCTTTCTAGAGTATAAGAATAAACCACTTGCTGCTCCCAAAAATATTAATATTCCCACTTTGAAACCATTTCTTCCAGCCATCAATGACACTTCCTTCGTTGCCAACTTTAGTAACAAATTCTTCAGTTTGAACCCTGCAAAGGTGCCTCAAATAGTTGACAAGAGCTTCTTCTTCACAATTGGACTTGGAACAAGTCCTTGTCCCAAAAACCAAACATGCCAAGGACCGAACAACAGTTCAAAGTTTGCAGCCTCAATGAACAACATATCTTTCACTCTTCCTTCCATAGCACTTCTTGAGCAACATTTCTTTGGGCAAGCTAATAATGGCATTTACACCACTGATTTCCCTGCCATGCCACTCATGCCATTCAACTACACGGGGACTCCACCGAACAACACTTTGGTCGGTAATGGAACAAAGACTGTGGTGATACCCTTTAACACAAGCGTGCAAGTGGTGCTTCAGGACACTAGCATTTTGGGAGCTGAGAGCCACCCCTTGCACCTTCATGGCTTTAATTTCTATGTTGTGGGTCAAGGCTTTGGGAACTTTAATCCTAACACTGACCCTCAAATATTCAATCTTTTTGACCCCGTTGAAAGGAACACTGTTGGTGTGCCCTCTGGTGGTTGGGTTGCAATCCGATTCCTTGCTGACAATCCAGGTGTTTGGCTGATGCATTGCCACTTTGATGTCCACCTTAGTTGGGGGTTGAGGATGGCTTGGATTGTTGAGGATGGGAAGCTACCTAATCAGAAGTTGCCTCCTCCACCAGCTGATCTCCCCAAGTGTTGA 1761 0.4492 MIKPIPSSPSLFVAFLFATSFLWSFPEFVLATSKHGSATRHYKFDIRLRNVTRLCHTKSMVTVNGKFPGPRVVAREGDRIVVKVVNHVPNNVSIHWHGVRQLQSGWADGPSYITQCPIQTGQNYVYNFTIVGQRGTLFWHAHFSWLRATLYGPLILLPRRNESYPFEKPYKEVPIIFGEWWNADPEAVIAQALQTGAGPNVSDAYTFNGLPGPFYNCSNNETDTDTFRLKVKPGKTYLLRLINAALNDELFFSIANHTLVTVEADATYVKPFESDIIVLGPGQTSNVLLKTKAEYPNANFLMLARPYFTGMGTFDNSTVAGFLEYKNKPLAAPKNINIPTLKPFLPAINDTSFVANFSNKFFSLNPAKVPQIVDKSFFFTIGLGTSPCPKNQTCQGPNNSSKFAASMNNISFTLPSIALLEQHFFGQANNGIYTTDFPAMPLMPFNYTGTPPNNTLVGNGTKTVVIPFNTSVQVVLQDTSILGAESHPLHLHGFNFYVVGQGFGNFNPNTDPQIFNLFDPVERNTVGVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLPPPPADLPKC* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1167 586 Gene3D - 170 366 IPR008972 -
Gso11g1167 586 Gene3D - 27 157 IPR008972 -
Gso11g1167 586 Pfam Multicopper oxidase 172 327 IPR001117 -
Gso11g1167 586 SUPERFAMILY Cupredoxins 35 190 IPR008972 -
Gso11g1167 586 CDD CuRO_1_LCC_plant 42 158 IPR034288 GO:0005507
Gso11g1167 586 PANTHER MULTI-COPPER OXIDASE 9 586 IPR045087 -
Gso11g1167 586 PANTHER LACCASE 9 586 - -
Gso11g1167 586 CDD CuRO_2_LCC_plant 173 325 IPR034285 -
Gso11g1167 586 SUPERFAMILY Cupredoxins 368 586 IPR008972 -
Gso11g1167 586 Gene3D - 390 586 IPR008972 -
Gso11g1167 586 ProSitePatterns Multicopper oxidases signature 1. 544 564 IPR033138 -
Gso11g1167 586 Pfam Multicopper oxidase 49 159 IPR011707 GO:0005507
Gso11g1167 586 ProSitePatterns Multicopper oxidases signature 2. 549 560 IPR002355 GO:0005507
Gso11g1167 586 CDD CuRO_3_LCC_plant 432 569 IPR034289 GO:0005507
Gso11g1167 586 Pfam Multicopper oxidase 448 569 IPR011706 GO:0005507|GO:0016491
Gso11g1167 586 TIGRFAM laccase: laccase 38 586 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gso11g1167 586 SUPERFAMILY Cupredoxins 167 364 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1167 Gso-Chr11 10471171 10475855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1167 K05909 - gmx:100792688 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0503 12 4472216 4476021 Gso11g1167 11 10471171 10475855 GST