Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0493 ATGTCGGGCGGTTTCTTTAGAGGCACATCTGCGGATCAGGACACTCGGTTTTCGAACAAGCAAGCGAAGCTGATGAAATCGCAGAAGTTTGCACCGGAATTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAAGTGATTAAGCCTTGGATCACCAGAAGGGTGACCGAGCTTCTTGGGTTTGAAGATGAAGTGCTTATTAACTTCATACACAGTCTTCTGGATGCAAAGGAAGTGAATGGGAAAGAAGTTCAAATACAAATTACAGGATTTATGGAAAAGAACACTGGAAAGTTCATGAAAGAGCTTTGGATGCTGCTTCTCAGTGCGCAGAAAAATGCCAGTGGTGTTCCTCAGCAGTTCTTGGATGCCAAGGAAGAAGAACTCCTGAAGAAGAAGGCTGAAAGTGATCTGATTGCAAGTGAAATTCAGAGGAAAAAAGATAAGGAAGGTAGAGAGATCATGGAAGAGAGGTTGAAGAAACTGGACGGTGGATTTGATTCGAAGGATAATGATACTGCATCAGATCCAACTTTGAAGCCCAGGGATTCAGGGTACTACGAGCGGGATGGGAAGGAAACTGATAAGAGGAATGGTGTAAGAGCAAGGAGCAGGTTTTCTAGGTCTCCACATTCACCTGCAGTTTCCACTTCGCCTCATCGAGGCTCACCTTCAAGGTCAATGAGCAAATCATTTTCAAATTCTCGAAGTTATTCAGGTGGTAGACACAGGTCAAGGAGTATATCTAGGTCTCCAGAGGCTCGAGGTCGCTCTCGTTCTTTTGAAAGGATTCGTCATTCTCCACGACGACGGTCTATTTCTCCTCACAGGCATTCACCACGACGTTCTCCTTATAGGAGGATACCTTATTCAAGAAGATCTAGATCTCCTTCTCCTGTACGACGTAGAATGCATTCTCCAGTTCATCGTAGATCACCATCTTTTCGACGACGTAGATCACCTTCTCTTGTGCGACGGCGTAGACCACCTTCTCCAATACGTCGACGTAGATCACCTTCCCCTGTGCGTCGGCGTAGATCACCTTCCCCTGGGCGCCGACGTAGATCACCTTCCCCCGGGCCTCGACACAGATCACCTTCTCCCGGGCCTCGACACAAATCACCTTCTCCTGGGCGCCATCATAGATCACCATCACCTCTTGGACGACGAAGGTCACTCTCACCTAGACGACGAAGATCAGTTGTTACTCGGCATAGGTCACCTTCACTAGTACGCCGAATACCACCAACCAATGTGCGGAGAAGATCAGACTCCCCCATGCAATCCCCCTCCCCCATACGACGAAGGTATGGTAGTAGAACTCCTCCACACTCTCCATCTCCATTGCGACGTAGATCACCTATTCCTGGTAAGCAAAGATCTCCTAGTATCTCCCCACAGAGGTCTCCTCGAGATGAATGGAGTTCTCAATCTCCAATACGGCGTGTATCTCCATCTCCAATCAGGAAAAATTCTCCAAGACACAAAAGAAGTCCCTTGCCGTCTTCTATGGGGAGAGTCAGAACACAAGAAAGATTGTCATCTGAGACTCGGCAACCCTCTAGTCCCCTGGGGTCTACACGAAGAGATAAAAGTGGCAAAGCTTCACACTATAAATCACAAGATTCAATGTCCACACAAGAGAAGTCTCCAATTCGATCTGTATCTCCAGAAGAGAGGAGTGAGACAAGCAGTGAAGGTCGAAGTCCTCATGAGAGCCCTATGAAACAAAGAAGAGAAAAGTTGTCCAATGAAAGAAGCATGAGTCCTCTGAAGAAACAAAGAACCCAGAAACCTAGCCGTGACAGCCCAGATACAAGAGAAGAAGCAGAAGAAACATACTATTCCAGAGAAAGCAGAGATCCAAAAATGAATTCATCACAAAAGATATCAAAACATTCCCCCATCAGTAAGCGAAAAGGTTCACCTGCAAAATTTCGTCATGAGGATTTCTCTCCTGAAAGGGTGTCAGGTCATACAGCTTCTGAACATCATTATGATAACGATGATTGGAGTAAGAAAGGCCGGGAGATAAAACGTGATAAATCTTCCAGACAGGGCAATGAATTTCCTGCTCAAAAGTCATCAATCAACAAAGAAACTTTTTCCAGGGAGAAGCCTCAAGAATCTTATGCTGTAGATGTTAAAAAATCAGATGACAAGGACCAATCCCGTTCAAACTATGCCAAAAGTAGTGGTCGACACCACAAATCCGAAGCCACTCAAGATTTAGTTGGAAAAGGTGATCGTGTCAATCACAGTGCTTCATATGATTCTGTTTCTGAGGATAGTGGTAAGCATAGACGGGAGGGAAAGGATAGGAAAAGGCATAAAAGGTCTGAGAAAAAGTATGCATCTTCTGATGAGGATTATAGTGATGATTCTGAGTTAGAGGACAGGAAAGAGGCTAAGAGGAGGAGAAAAGAGGAGAAGAAGCTGCGGAAGGAGGAGAAGCGTCGAAGACGTGAAGAGAAGCGACGCAGAAGGGAAGAACGGCGTGCAGAGAAGCTGAAAATGAAGAGTAAAACAGACGATATTTCAGATGATGAGGAAGCTAAACAAATGGGTTATCATCAAAGTGATAGTGAAGATGAGCAAAAGAAGCTTGAGATTGAATTGCGGAACAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGCGTGAATAACTAA 2673 0.4549 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWMLLLSAQKNASGVPQQFLDAKEEELLKKKAESDLIASEIQRKKDKEGREIMEERLKKLDGGFDSKDNDTASDPTLKPRDSGYYERDGKETDKRNGVRARSRFSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYSGGRHRSRSISRSPEARGRSRSFERIRHSPRRRSISPHRHSPRRSPYRRIPYSRRSRSPSPVRRRMHSPVHRRSPSFRRRRSPSLVRRRRPPSPIRRRRSPSPVRRRRSPSPGRRRRSPSPGPRHRSPSPGPRHKSPSPGRHHRSPSPLGRRRSLSPRRRRSVVTRHRSPSLVRRIPPTNVRRRSDSPMQSPSPIRRRYGSRTPPHSPSPLRRRSPIPGKQRSPSISPQRSPRDEWSSQSPIRRVSPSPIRKNSPRHKRSPLPSSMGRVRTQERLSSETRQPSSPLGSTRRDKSGKASHYKSQDSMSTQEKSPIRSVSPEERSETSSEGRSPHESPMKQRREKLSNERSMSPLKKQRTQKPSRDSPDTREEAEETYYSRESRDPKMNSSQKISKHSPISKRKGSPAKFRHEDFSPERVSGHTASEHHYDNDDWSKKGREIKRDKSSRQGNEFPAQKSSINKETFSREKPQESYAVDVKKSDDKDQSRSNYAKSSGRHHKSEATQDLVGKGDRVNHSASYDSVSEDSGKHRREGKDRKRHKRSEKKYASSDEDYSDDSELEDRKEAKRRRKEEKKLRKEEKRRRREEKRRRREERRAEKLKMKSKTDDISDDEEAKQMGYHQSDSEDEQKKLEIELRNKALESLKAKRGVNN* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0493 890 MobiDBLite consensus disorder prediction 161 869 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 812 828 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 539 553 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 247 262 - -
Gso12g0493 890 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Gso12g0493 890 MobiDBLite consensus disorder prediction 210 246 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 263 290 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 459 486 - -
Gso12g0493 890 Gene3D PWI domain 33 125 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 554 628 - -
Gso12g0493 890 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 390 887 - -
Gso12g0493 890 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 410 - -
Gso12g0493 890 Coils Coil 799 841 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 643 688 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 161 203 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 422 436 - -
Gso12g0493 890 Pfam PWI domain 46 115 IPR002483 GO:0006397
Gso12g0493 890 MobiDBLite consensus disorder prediction 504 530 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 829 869 - -
Gso12g0493 890 MobiDBLite consensus disorder prediction 297 407 - -
Gso12g0493 890 SMART pwi_2 40 114 IPR002483 GO:0006397
Gso12g0493 890 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Gso12g0493 890 MobiDBLite consensus disorder prediction 700 747 - -
Gso12g0493 890 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 390 887 - -
Gso12g0493 890 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0493 Gso-Chr12 4367842 4373528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0493 K13171 - gmx:100810238 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0493 12 4367842 4373528 Gso11g1154 11 10352395 10358154 GST