Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1154 ATGTCGGGCGGTTTCTTTCGAGGCACATCGGCGGATCAAGACACTCGGTTTTCGAACAAGCAAGCGAAGCTGATGAAATCGCAGAAGTTTGCACCGGAACTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAAGTAATTAAGCCTTGGATCACCAGAAGGGTGACTGAGCTTCTTGGGTTTGAAGATGAAGTGCTTATTAACTTCATACACGGTCTTCTGGATGCGAAGGAAGTGAATGGGAAAGAAGTTCAAATACAAATTACTGGATTTATGGAAAAAAACACTGGAAAGTTCATGAAAGAGCTTTGGATGCTGCTTCTCAGTGCGCAGAAAAATGCAAGTGGTGTTCCTCAGCAGTTCTTGGATGCCAAGGAAGAAGAACTCCTGAAGAAGAAGGCTGAAAGTGATCTGATTGCAAGTGAAATTCAGAGGAAAACAGATAATGAAGATAGAGAGATCATGGAAGAGAGGCTGAAGAAACTGGACGGTGGATTTGATTCGAAGGATAATGATACTGCATCAGATCCAACTTTGAAGCTCAGGGATTCAGGGTACCGGGAGTGGGATGGGAAGGAAACTGACAAGAGGAATGGTGTTAGAGCAAGGAGCAGGCTTTCTAGGTCTCCACATTCACCTGCAGTTTCCATTTCACCTCATCGAGGCTCACCTTCAAGGTCAATGAGCAAATCATTTTCAAATTCTCGAAGTTATTCAGGTGGTAGACACAGGTCAAGGAGTATATCTAGGTCTCCAGAGGCTCAAGGTCCCTCTCTTTCTGCTGAAAGGATTCGCCGTTCTCCACGACGACGATCTATTTCTCCTCAAAGGCATTCCCCACGACGTTCTCCTCATAGGAGGATACCTTATTCAAGAAGATCTAGATCTCCTTCTCCTGAACGACGCAGAATGCATTCTCCAGTCCATCGTAGATCACCATCTTTTCGACGACGTAGATCACCTTCTCCTGTTCGACGACATAGATCGCCTTCTCCTGTGCGACGACGTAGATCGCCTTCTCCTGTGCGACGACGTAGATCGCCTTCTCCTGTGCGACGACGTAGATCGCCTTCTCCTGTGCGACGACGTAGATCACCTTCTCCTGTGCGACGACGTAGATCACCTTCTCCAGTGCGTCGGCGTAGATCACCTTCTCCAGTGCGCCGACGTAGATCACCTTCCCCTGGGCGTCGACACAGATCACCTTCTCCTGGGCGCTGTCATAGATCACCATCACCTCTTGGACAACGGAGGTCACTCTCACCTAGACGACGAAGATCACTTGTTACTCGGCATAGGTCACCTTCACCAGTACGCCGAATACCGCCAACCAATGTGCAGAATAGATCAGACTCCCCCATGCAATCCCCCTCCCACATACGACAAAGGTATGGTAGTAGAACTCCTTCACTCTCTCCATCTCCATTGCAACGTAGATCACCTATTCCTAGTAAGCAAAGATCTCCCAATATCTCCCCACAGAGGTCTCCTCAAGATGAACAGAGTTCTCAATCTCCAATACGGTGTGTATCTCCATCTCCAATTAGGAAAAATTCTCCAAGACACCAAAAAAGTCCCTTGCATTCTTCTATGGGGAGAGTCAGAACAGAATCCGTGACTCGTCAACCCTCTAGTCCTCTGGGGTCGGCAATAAGAGATAAATGTGGCAAAGCTTCACACTATAAATCACAAGATTCAATGTCCACACCTGAGAAGTCTCCAATTCAATCTGTATCTCAAGAAGCAAGGAGTGAGACCAGCAGTGAAGGTCGAAGTCCTCATGAGAGCCCTATGAAACAAAGAAGAGATAAGTTGTCCAATGAAATAAACACGAATCCTCTGAAGAAACAAAGAACCCAAAGACCTAGCCGTGACAGCCCAGATACAAGAGATGAAGCAGAAGAAACGCACTATTCCAGAGAAAGCAGAGATCCAAAAATGAATTCATCACAAAAGATATCAAAACATTTCCCTGTTAGTAAGCGAAAAGGTTCACCTGCAAAATATCGTCACGAGGAGTTCTCTCCTGAAAGGGTGTCAGGTCATCCAGCTTCTGAACATCATTATGATAACAATGATTGGAGTAAGAAAGGCCAGGAGATAATGCGTGATAAATCTTCCGGAAAGGGCAATGAATTTCCTGCTCAAAAGTCATCAATGAACAAAGAAACTTTTTCCAGGGAGAAGCCTCAAGAATCTTATGCTGTAGATATTAAAAAATCAGATGTCAAGGACCAATCCCATTCAAACTATGCCAAAAGCAGTTATCGGCATCACAAATCCGAAACCACTCAAGATTTAGTTGGAAAAGGTGATCGTGTCAATCACAATGCTTCACATGATTCTGTTTCTGAGGATAGTGGTAAGCATAGACGGGAGGGAAAGGATAGGAAAAGGCATAAAAGGTCTGAGAAAAAGTATACATCTTCTGATGAGGATTATAGTGATGATTCTGAGTTAGAGGACAGGAAAGAGGCTAAGAGGAGGAGAAAAGAGGAGAAGAAGCTGCAGAAGGAGGAGAAGCGTCGAAGATGTGAAGAGAAGCGACGCAGAAGGGAAGAACGGCGTGCGGAGAAGCTGAAAATGAAGAGTAAAACAGATGATATTTCAGGTGATGAGGAGGCTAAACGAATGGATTATCATCAAAGTGATAGTGTAGTTACACCATCTGAGCAAAAGAAGCTTGAGATTGAATTGCGGAACAAGGCTCTTGAATCCCTCAAAGCAAAGAAGGGCATGAATAACTAA 2751 0.4526 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHGLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWMLLLSAQKNASGVPQQFLDAKEEELLKKKAESDLIASEIQRKTDNEDREIMEERLKKLDGGFDSKDNDTASDPTLKLRDSGYREWDGKETDKRNGVRARSRLSRSPHSPAVSISPHRGSPSRSMSKSFSNSRSYSGGRHRSRSISRSPEAQGPSLSAERIRRSPRRRSISPQRHSPRRSPHRRIPYSRRSRSPSPERRRMHSPVHRRSPSFRRRRSPSPVRRHRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPGRRHRSPSPGRCHRSPSPLGQRRSLSPRRRRSLVTRHRSPSPVRRIPPTNVQNRSDSPMQSPSHIRQRYGSRTPSLSPSPLQRRSPIPSKQRSPNISPQRSPQDEQSSQSPIRCVSPSPIRKNSPRHQKSPLHSSMGRVRTESVTRQPSSPLGSAIRDKCGKASHYKSQDSMSTPEKSPIQSVSQEARSETSSEGRSPHESPMKQRRDKLSNEINTNPLKKQRTQRPSRDSPDTRDEAEETHYSRESRDPKMNSSQKISKHFPVSKRKGSPAKYRHEEFSPERVSGHPASEHHYDNNDWSKKGQEIMRDKSSGKGNEFPAQKSSMNKETFSREKPQESYAVDIKKSDVKDQSHSNYAKSSYRHHKSETTQDLVGKGDRVNHNASHDSVSEDSGKHRREGKDRKRHKRSEKKYTSSDEDYSDDSELEDRKEAKRRRKEEKKLQKEEKRRRCEEKRRRREERRAEKLKMKSKTDDISGDEEAKRMDYHQSDSVVTPSEQKKLEIELRNKALESLKAKKGMNN* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1154 916 MobiDBLite consensus disorder prediction 821 882 - -
Gso11g1154 916 Pfam PWI domain 46 115 IPR002483 GO:0006397
Gso11g1154 916 MobiDBLite consensus disorder prediction 723 793 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 271 293 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 562 587 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 164 894 - -
Gso11g1154 916 Coils Coil 818 864 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 666 708 - -
Gso11g1154 916 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Gso11g1154 916 MobiDBLite consensus disorder prediction 164 203 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 441 548 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 619 651 - -
Gso11g1154 916 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Gso11g1154 916 SMART pwi_2 40 114 IPR002483 GO:0006397
Gso11g1154 916 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 412 - -
Gso11g1154 916 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 381 913 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 305 406 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 210 257 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 588 610 - -
Gso11g1154 916 Gene3D PWI domain 33 125 - -
Gso11g1154 916 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 412 - -
Gso11g1154 916 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 381 913 - -
Gso11g1154 916 MobiDBLite consensus disorder prediction 420 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1154 Gso-Chr11 10352395 10358154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1154 K13171 - gmx:100790051 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1154 11 10352395 10358154 Gso11g1154 11 10352395 10358154 ECH
Gso12g0493 12 4367842 4373528 Gso11g1154 11 10352395 10358154 GST