Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0492 ATGGCTCCCACTCTTACATCCAATTCATCTTTTATAACTAGCACTCCTCATTCAAGGGTGACCCTCCGGAATCCAAGGCTGAGAGTCTTTGCCAAGAAGTCTGGATCATTCCCATCTTTTGGGCTAGGCAAGCCCAAAGATGATTCTTCTTCTTCAACTGAAGAAAAAGATGGCTCATCCAATTCCAACCCCTTTCGTTTGGACTTCGGAAAGATCTCTCTGATCCCAGTTCCAAGCAACACTTCTGCGCCTGGCTTTTCTTTTGGAAACCCAAGACGCAAGGACCCTTCCACAGTGTTTGTTGCTGGCGCAACGGGGCAGGCTGGTATTCGCATTGCACAAACGTTGTTAAGGGAAGGTTTTAGTGTACGTGCTGGAGTCCCCGAACTTGCTTCCGCACAAGAACTTGCTCGTCTTGCTGCTCAATACAAGATTATATCAAATGAACAGGCAAAGCGTCTGAACGCTGTGCAATCAAGCTTTGACAATGCAGACACAATAGCCAAAGCAATAGGCAATGCCAGCAAGGTGGTTGTCACCATTGGTCCCACAGAGAACGGTCCAACCACAGAGGTCTCCGCATCAGATGCCTTGCAAGTGGTTCAGGCAGCACAGCTGGCAGGAGTAGGCCATGTGGCTGTCATTTACGACGAGAGCAGCGCCGGGGCCTCAACCTACAATGTGCTGGATGGCCTCTCATCTTTCTTCAGCAACCTCTTCTCCAGGTCTCAACCGTTGACTATACAAGAGTTCTTGCAGAAAGTGATTGAAACGGATGTCAAATACACCTTCATCAAGACAAGTTTGACCGATGATTTCTCACCGGAGAGTTCCTACAATGTGGTCGTCTTAGGCGAAGGAAGCGATGGTGCAAACGACTATAAAGTAGCCAAGTCCAAGATTGCGTCGTTGGTGGCTGATGTCTTCTCCAACACAGAGGTAGCAGAAAACAAGGTTGTGAAAGTGTACTCGGATCCTGGTGCCCCCTTGAAGCGTGTAGATGAACTTTTCAGCCCTATTCCTGAGGACGGAAGAAGGAAAGCCTATGCTGAAATGCAGGAAAAAGCAAAGGCTGAGGAAGAAGCAAGAGTGGCAGCTGAAAAGGCCAATGAAGCTTCTGAATCAGCAAAGAAGTTGGAAGAAGAGGTGAAGAAGCTTTTGCAGCAAGAAGCACGGGCTGCAAGTCTGGCTCAGGAGGCCCAAGAGAAGGCAGAGGCAGCTGGGGCTTCGGTGGAAAACCTCTTGAACAAGGCAAAAGACTTTGGTGCAGGGTTTTCCTGGGAAAAGTTGAGCTCACAGATTACTACTTCAATCCAAAAGCCTGATGAGGATGAGAAACCAAAGGTGCAGCTAGCCACTGTAAGGGGACAGGCCAAGGCTCGGAATCTTGCTCCTAACAAAGCAGTGGTTAGACAAACGTCTCAGAGAAGTGCTGGTAAGCCAAAGGTGGAAAAACCAAAGCAGGCAGAGACACCAAAGGAGGTGAGGAATGTATTTGGTGGCTTGTTCAAGCAAGAGACTATCTATGTTGATGATGACTAG 1542 0.4851 MAPTLTSNSSFITSTPHSRVTLRNPRLRVFAKKSGSFPSFGLGKPKDDSSSSTEEKDGSSNSNPFRLDFGKISLIPVPSNTSAPGFSFGNPRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELASAQELARLAAQYKIISNEQAKRLNAVQSSFDNADTIAKAIGNASKVVVTIGPTENGPTTEVSASDALQVVQAAQLAGVGHVAVIYDESSAGASTYNVLDGLSSFFSNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFSPESSYNVVVLGEGSDGANDYKVAKSKIASLVADVFSNTEVAENKVVKVYSDPGAPLKRVDELFSPIPEDGRRKAYAEMQEKAKAEEEARVAAEKANEASESAKKLEEEVKKLLQQEARAASLAQEAQEKAEAAGASVENLLNKAKDFGAGFSWEKLSSQITTSIQKPDEDEKPKVQLATVRGQAKARNLAPNKAVVRQTSQRSAGKPKVEKPKQAETPKEVRNVFGGLFKQETIYVDDD* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0492 513 Pfam NAD(P)H-binding 103 311 IPR016040 -
Gso12g0492 513 Coils Coil 349 417 - -
Gso12g0492 513 MobiDBLite consensus disorder prediction 1 21 - -
Gso12g0492 513 MobiDBLite consensus disorder prediction 478 492 - -
Gso12g0492 513 MobiDBLite consensus disorder prediction 1 65 - -
Gso12g0492 513 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 97 330 IPR036291 -
Gso12g0492 513 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 513 - -
Gso12g0492 513 MobiDBLite consensus disorder prediction 456 496 - -
Gso12g0492 513 Gene3D - 90 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0492 Gso-Chr12 4361813 4365432 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0492 - - gmx:100790239 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0492 12 4361813 4365432 Gso11g1153 11 10347523 10350748 GST