Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1153 ATGGCTCCCACTCTTACATCCAATTCATCTTTTTTAAGCACCAGTCCTCATTCAAGGGTGAGCCTCCGGAATCCAAGGCTGAGAGTCTTTGCCAAGAAGTCTGGATCATTCCCATCATTTGGACTAGGCAAGCCCAAAGATGATTCTTCTTCTGCTGAAGAAAAAGATAACTCATCCAATTCCAACCCCTTTCGTTTGGACTTTGGAAAGATACCCGATGTAACGTCTTTGATCCCAGTTCCAAGCAACACTTCTGCGCCAGGCTTTTCTTTTGGAAACACAAGGCGCAAGGACCCTTCAACAGTGTTTGTTGCCGGCGCAACGGGGCAGGCTGGTATTCGCATTGCACAAACGTTGTTAAGGGAAGGTTTCAGTGTACGGGCTGGAGTCCCCGAACTTGGTTCTGCCCAAGAACTTGCTCGTCTCGCTACTCAATACAAGATTATATCAAATGAACAGGCAAAGCGTCTGAACGCTGTGCAATCAAGCTTTGACAATGCAGACACAATAGCCAAAGCAATAGGCAATGCCGGCAAGGTGGTTGTCACCATTGGTCCGACAGAGAATGGTCCAACCGCAGAGGTATCTTCATCAGATGCCTTGCAAGTGGTTCAGGCAGCACAGCTGGCAGGAGTAGGCCATGTGGCCATCGTCTATGACGAGAGCAGCACTGGGGCCTCAACCTACAATGTACTGGATGGCCTCTCATCCTTCTTCAACAACCTCTTCTCCAGGTCTCAACCGTTGACCATACAAGAGTTCTTGCAGAAAGTCATTGAAACGGATGTCAAGTACACCTTCATCAAGACAAGTTTGACTGATGATTTCTCACCGGAGAGTTCCTACAATGTGGTTGTCTTGGGCGAAGGAAGCGCCAGTGCAAACGACTATAAAGTAGCAAAGTCCAAGATCGCATCGTTGGTGGCTGATGTCTTCTCCAACACAGAGGTAGCAGAAAACAAGGTTGTGAAAGTGCACTCGGATCCCAGTGCCCCCTTGAAGCGTGTAGATGAACTTTTCAGCCCTATTCCTGAGGATGGAAGAAGGAAAGCCTATGCTGAAATGCAGGAAAAAACAAAGGCAGAGGAAGAAGCAAGAGTGGCAGCTGAAAAGGCCCGTGAAGCTTCTGAATCAGCAAAGAAGTTGGAAGAAGAGGTGAAAAGGCTTTCACAGCAAGAAACACGGGCTGCAAGTCTGGCTCAAGAGGCCCAAGAGAAGGCAGAGGCTGGCGGGGCTTCAGTTGAAAACCTCTTGAACAAGGCAAAAGACTTTGGTGCAGGGTTTTCCTGGGAAAAGTTGAGCTCACAGATTACTACTTCAATCCAAAAGCCTGATGAGGATGAGAAACCAAAGGTGCAGCTAGCCACTGTAAGGGGACAGGCCAAGGCTCGGAATCTCGCGCCTAACAAAGCAGTGGTCAAACAAACACCTCAGAGAAGTGCAGCTAAACCAAAGGTGGAAAAACCAAAGCAGACAGAGACACCAAAGGAGGTGAGGAAAGTATTTGGTGGCCTGTTCAAGCAAGAGACTATCTATGTTGATGATGACTAG 1551 0.4823 MAPTLTSNSSFLSTSPHSRVSLRNPRLRVFAKKSGSFPSFGLGKPKDDSSSAEEKDNSSNSNPFRLDFGKIPDVTSLIPVPSNTSAPGFSFGNTRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELGSAQELARLATQYKIISNEQAKRLNAVQSSFDNADTIAKAIGNAGKVVVTIGPTENGPTAEVSSSDALQVVQAAQLAGVGHVAIVYDESSTGASTYNVLDGLSSFFNNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFSPESSYNVVVLGEGSASANDYKVAKSKIASLVADVFSNTEVAENKVVKVHSDPSAPLKRVDELFSPIPEDGRRKAYAEMQEKTKAEEEARVAAEKAREASESAKKLEEEVKRLSQQETRAASLAQEAQEKAEAGGASVENLLNKAKDFGAGFSWEKLSSQITTSIQKPDEDEKPKVQLATVRGQAKARNLAPNKAVVKQTPQRSAAKPKVEKPKQTETPKEVRKVFGGLFKQETIYVDDD* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1153 516 MobiDBLite consensus disorder prediction 1 67 - -
Gso11g1153 516 MobiDBLite consensus disorder prediction 356 391 - -
Gso11g1153 516 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 516 - -
Gso11g1153 516 MobiDBLite consensus disorder prediction 481 499 - -
Gso11g1153 516 MobiDBLite consensus disorder prediction 1 21 - -
Gso11g1153 516 MobiDBLite consensus disorder prediction 356 411 - -
Gso11g1153 516 Pfam NAD(P)H-binding 106 314 IPR016040 -
Gso11g1153 516 MobiDBLite consensus disorder prediction 458 499 - -
Gso11g1153 516 Gene3D - 92 333 - -
Gso11g1153 516 Coils Coil 352 409 - -
Gso11g1153 516 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 335 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1153 Gso-Chr11 10347523 10350748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1153 - - gmx:100801140 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1153 11 10347523 10350748 Gso11g1153 11 10347523 10350748 ECH
Gso12g0492 12 4361813 4365432 Gso11g1153 11 10347523 10350748 GST