Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0469 ATGGCCTCGGGACTCGCCTTGCGATTCAGATCCCATCTCCTCCGCACCGCCTCCCTCCTCCCATCCTCCCTTCTCCACCACCCTCCCATCCAACCCTCGCCGCCGCACCTCTCCCTCCACCGCCTCCTCTCCACGGCGCGCCGCTCCCCGCCGCGCTCGAAGAAATCCGTCGACATCAGCGCACGCGCGCGCCAGCTCCAGACGCGGCGCCTCTGGACCTACGCGCTCACCTTCGGTGGCCTCGCCGGCTTCGTCGTGATCGTTCTCAACAACTTCCAAGACCAGCTCGTCTTCTACGTCACCCCAACCGAAGCCCTCGAAAAATACGCGAACAATCCAACAAAAGCGCGGTTCCGGCTGGGCGGTCTTGTCCTGGAAGGCAGCGTGGTGTACCCGGCGTCGTCGCCGGAGGTGGAGTTCGTCGTCACCGATCTCATCTCCGACATCGTGGTACGGTACGAGGGATCGTTGCCGGATTTGTTCAGGGAAGGGCACTCCGTTGTTGTGGAAGGGCTCGTGAAACCGTTCACGGACGAGATCAGGAAGGAGGTGTCGGCGAAGAACGTTTCCGAGAAGGCGAGGAAGATAGAGTGCTATTTTTCGGCCACGGAGGTTCTCGCCAAGCATGATGAGAAGTATATGCCGAAGGAAGTTGCTGCTGCTATTGAGAAGAATAAGAAGATTATTGAGGATGCTGCCACTGCCACCGCCACCGCCACCGCCACCGCCACCGTGGCCATGGAGGGACCAAAGACACCATAG 762 0.6076 MASGLALRFRSHLLRTASLLPSSLLHHPPIQPSPPHLSLHRLLSTARRSPPRSKKSVDISARARQLQTRRLWTYALTFGGLAGFVVIVLNNFQDQLVFYVTPTEALEKYANNPTKARFRLGGLVLEGSVVYPASSPEVEFVVTDLISDIVVRYEGSLPDLFREGHSVVVEGLVKPFTDEIRKEVSAKNVSEKARKIECYFSATEVLAKHDEKYMPKEVAAAIEKNKKIIEDAATATATATATATVAMEGPKTP* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0469 253 SUPERFAMILY Heme chaperone CcmE 92 221 IPR036127 GO:0005886|GO:0017003|GO:0017004
Gso12g0469 253 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 64 226 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gso12g0469 253 Pfam CcmE 67 216 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gso12g0469 253 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 1 240 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gso12g0469 253 Gene3D - 92 222 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0469 Gso-Chr12 4183269 4184590 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0469 - - gmx:100806496 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0469 12 4183269 4184590 Gso11g1124 11 10146962 10148238 GST