Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1124 ATGGCCTCTAGACTCGCCCTCCGCTTCAGATCCCATCTCCTCCGCACCGCCTCCCTCCTTCAAACCTTGCCGCCGCCGCCCCTCTCCCTCCACCGCCTCCTCTCCACTTCCCGCCGCGCGCCTCCGCGCTCCAAAAAATCAGTCGACATCGGCGCGCGCGCGCGTCAGCTCCAGACGCGGCGCCTCTGGACCTACGCGCTCACCTTCGGCGGCCTCGCGGGCTTCGTCGTGATCGTCCTCAACAACTTCCAAGACCAGCTCGTCTTCTACGTCACCCCAACCGAAGCCCTCGAAAAATACGCCACCAACCCCACAAAAGCGCGGTTCCGGTTGGGAGGCCTTGTTCTCGAAGGCAGCGTGGTTTACCCGGCGTCGTCGCCTGAGGTGGAGTTCGTCGTCACCGATCTCATCTCCGACATGGTGGTACGGTACGAGGGATCGTTGCCGGATTTGTTCAGGGAAGGGCACTCTGTGGTTGTGGAAGGGCTCGTGAAACCGTTTACGGAGGAGATCAGGAAGGAGGTGTCGGTGAAGAACGTTTCCGAGAAGGCGAGGAAGATAGAGTGCTATTTTTCGGCTACCGAGGTTCTCGCCAAGCATGATGAGAAGTACATGCCTAAAGAAGTTGCTGCTGCTATTGAGAAGAATAAGAAGATTATTGAGGATGCTGCCACTGCCACCGTGGCCGCCGCCGCCACCGCGGAGGGACCGAAGACACCATAG 723 0.5989 MASRLALRFRSHLLRTASLLQTLPPPPLSLHRLLSTSRRAPPRSKKSVDIGARARQLQTRRLWTYALTFGGLAGFVVIVLNNFQDQLVFYVTPTEALEKYATNPTKARFRLGGLVLEGSVVYPASSPEVEFVVTDLISDMVVRYEGSLPDLFREGHSVVVEGLVKPFTEEIRKEVSVKNVSEKARKIECYFSATEVLAKHDEKYMPKEVAAAIEKNKKIIEDAATATVAAAATAEGPKTP* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1124 240 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 55 217 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gso11g1124 240 Pfam CcmE 58 207 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gso11g1124 240 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 1 231 IPR004329 GO:0017003|GO:0017004|GO:0020037
Gso11g1124 240 Gene3D - 83 213 IPR012340 -
Gso11g1124 240 SUPERFAMILY Heme chaperone CcmE 83 212 IPR036127 GO:0005886|GO:0017003|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1124 Gso-Chr11 10146962 10148238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1124 - - gmx:121172629 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1124 11 10146962 10148238 Gso11g1124 11 10146962 10148238 ECH
Gso12g0469 12 4183269 4184590 Gso11g1124 11 10146962 10148238 GST