Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0451 ATGACATTTAAAGGCTATTATTTCCTTTTGGGACTCATAGCTCTTGTTGTTGTTAGCACTTCCAAAGTTACATGCAAAATAGAAGCAGATACAGTTTCACCTATTATTGACATTTCACTCAATCGGAACAGTTTCCCTGAAGGCTTCATCTTTGGGGCAGGATCTTCCTCGTACCAGTTCGAAGGTGCAGCAAAGGAAGGTGGTAGAGAACCAAGTGTATGGGATACCTTCACCCATAATTATCCAGCTAAGATCAAAGATAGAAGCAATGGAGACGTGGCCATTGACTCATATCATCACTACAAGGAAGATGTTAGGATGATGAAGGATATGAATTTGGATTCATATAGATTTTCCATATCTTGGTCAAGGATTCTACCAAAAGGAAAGCTAAGTGGAGGTATAAATCAAGAGGGAATCAACTACTACAACAACCTTATCAATGAGCTAGTAGCTAATGGTATACAACCACTCGTCACTCTTTTTCATTGGGATCTTCCCCAAGCATTAGAAGATGAGTACGGAGGCTTCTTAAGTCCACGCATAGTGAAAGATTTTCGGAACTATGCGGAACTTTGCTTCAACGAATTTGGTGATAGGGTGAAGTATTGGGTTACTTTGAACGAGCCATGGAGTTACAGTCAGCATGGTTATGCAAATGGAGGAATGGCACCAGGTCGTTGTTCTGCTTGGTTAAATTCAAATTGCACTGGAGGTGATTCTGCAACAGAGCCTTATTTGGTTACACATCACCAACTTCTTGCTCATGCAGAAGCTGTTCGCGTGTACAAAACTAAGTATCAGGCATCTCAAAAGGGTTCAATAGGCATAACCTTAGTAGCTAATTGGTTTTTACCGCTCAAAGATACCAAATCTGATCAAAAGGCTGCTGAAAGAGCAATTGACTTCATGTGTGGATGGTTTATGGATCCATTAACAACGGGTGACTATCCCAAAAGCATGCGATCTCTTGTGAGAACAAGATTGCCGAAGTTTACTACAGAGCAATCCAAATTACTTATTGGTTCATTTGATTTTATTGGCCTAAACTATTACTCTACAACATATGCCTCAGATGCACCTCAGCTAAGCAATGCTAGACCCAATTACATAACAGATTCTCTTGTTACTCCTGCATATGAACGCGATGGAAAACCTATCGGTATAAAGATTGCTTCTGAGTGGATATATGTTTATCCAAGAGGAATTCGTGACCTTTTATTATATACCAAGGAAAAGTATAATAATCCTTTGATTTACATCACTGAAAATGGTATAAATGAGTACGATGAACCAACACAATTACTTGAGGAATCTCTTATGGATATTTTTAGAATTGATTATCATTATCGTCATCTCTTTTATCCTATTAGGAATGGCGCAAATGTTAAGGGATATTATGTATGGTCTTTGTTCGATAATTTTGAGTGGTCTTCGGGTTTTACATCGCGATTTGGAATGACCTATGTAGATTACAAAAATGATTTGAAGAGATACAAAAAATTCTCGGCATTATGGTTCAGGAATTTTCTCAAGAAAGAAACCAAACTTTATGGTTATAGCAAATAA 1569 0.3805 MTFKGYYFLLGLIALVVVSTSKVTCKIEADTVSPIIDISLNRNSFPEGFIFGAGSSSYQFEGAAKEGGREPSVWDTFTHNYPAKIKDRSNGDVAIDSYHHYKEDVRMMKDMNLDSYRFSISWSRILPKGKLSGGINQEGINYYNNLINELVANGIQPLVTLFHWDLPQALEDEYGGFLSPRIVKDFRNYAELCFNEFGDRVKYWVTLNEPWSYSQHGYANGGMAPGRCSAWLNSNCTGGDSATEPYLVTHHQLLAHAEAVRVYKTKYQASQKGSIGITLVANWFLPLKDTKSDQKAAERAIDFMCGWFMDPLTTGDYPKSMRSLVRTRLPKFTTEQSKLLIGSFDFIGLNYYSTTYASDAPQLSNARPNYITDSLVTPAYERDGKPIGIKIASEWIYVYPRGIRDLLLYTKEKYNNPLIYITENGINEYDEPTQLLEESLMDIFRIDYHYRHLFYPIRNGANVKGYYVWSLFDNFEWSSGFTSRFGMTYVDYKNDLKRYKKFSALWFRNFLKKETKLYGYSK* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0451 522 Pfam Glycosyl hydrolase family 1 42 514 IPR001360 GO:0004553|GO:0005975
Gso12g0451 522 Gene3D Glycosidases 32 513 - -
Gso12g0451 522 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 6 518 - -
Gso12g0451 522 PANTHER GLYCOSYL HYDROLASE 6 518 IPR001360 GO:0004553|GO:0005975
Gso12g0451 522 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Gso12g0451 522 SUPERFAMILY (Trans)glycosidases 40 512 IPR017853 -
Gso12g0451 522 ProSitePatterns Glycosyl hydrolases family 1 active site. 419 427 IPR018120 -
Gso12g0451 522 PRINTS Glycosyl hydrolase family 1 signature 343 357 IPR001360 GO:0004553|GO:0005975
Gso12g0451 522 PRINTS Glycosyl hydrolase family 1 signature 419 427 IPR001360 GO:0004553|GO:0005975
Gso12g0451 522 PRINTS Glycosyl hydrolase family 1 signature 460 477 IPR001360 GO:0004553|GO:0005975
Gso12g0451 522 PRINTS Glycosyl hydrolase family 1 signature 484 496 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0451 Gso-Chr12 3971618 3974851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0451 7 516 Glycoside Hydrolase AT5G44640 53.502 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0451 - K01188 gmx:100802780 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0451 12 3971618 3974851 Gso11g1104 11 9886327 9889187 GST