Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1104 ATGGCATTCAAGGGCTATTTCCTTCTCGGCCTCGTTACTCTTGTTCTTGTTAAATCTTCCAAAGTTACATGCGAAGAAGAATCAGTTAATACAGTTTCACCCATTATTGACATTTCACTCAATCGGAAGAGTTTCCCAGAAGGGTTCATATTTGGGGCGGGATCTTCCTCGTACCAGTTCGAAGGGGCAGCAAAGGAAGGTGGTAGAGGACCAAGTGTATGGGATACCTTCACCCATAATTATCCAGGAAAGATCATGGATAGAAGCAACGGAGACATGGCAATTGACTCATATCACAACTACAAGAAAGATGTTGGGATGATGAAGGATATGAATTTAGATTCATATAGATTTTCCATATCTTGGTCAAGAATTCTCCCAAAAGGAAAGCTAAGTGGAGGTATCAATCAAGAAGGAATCAACTATTACAACAACCTTATCAATGAGCTACTAGCTAATGGTATACAACCACTTGTAACTCTCTTTCATTGGGATCTTCCTCAAGCTTTAGAAGATGAGTATGGTGGCTTTTTAAGTCCGCGCATAGTGAAAGATTTTCGAGACTATGCAGAACTTTGCTTCAGGGAATTTGGCGATAGGGTGAAGTATTGGGTTACATTGAATGAGCCATGGAGTTACAGCCAAAATGGCTATGCAAATGGGCGAATGGCACCTGGCCGTTGTTCTGCATGGATGAATCTGAATTGCACTGGTGGTGATTCTTCAACGGAGCCTTACTTGGTTACACATCACCAACTTCTTGCTCATGCAGCTGCTGTTCGTGTGTACAAGACCAAGTACCAGGCATCTCAAAATGGTGTGATAGGCATAACCTTGGTAGCTAATTGGTTTTTGCCGCTCAGAGATACCAAATCTGATCAAAAGGCTACAGAAAGAGCAATTGACTTCATGTATGGATGGTTTATGGATCCATTAACATCTGGAGACTATCCCAACAGCATGCGATCACTTGTGAGGACAAGATTACCAAAGTTTACTGCAGAGCAATCCAAACTACTTATTGGTTCATTTGATTTTATTGGCCTAAACTATTACTCTACAACATATGCCTCTGACGCACCTGATCTAAGCGAAGCCCGTCCTAGCTACTTAACAGATTCTCTTGTCACTCCTGCATATGAACGTGATGGGAAACCTATTGGAATAAAGATTGCTTCTGATTGGTTATATGTTTATCCAAGAGGAATTCGTGACCTTTTATTATATACCAAAGAAAAGTACAATAATCCTTTGATTTACATCACTGAAAATGGTATAAATGAGTATAATGAACCAACATTATCACTTGAGGAATCTCTTATAGATACCTTCAGAATTGATTATCATTACCGTCATCTCTTTTATCTTCAATCCGCAATTAGGAATGGCGCAAATGTGAAGGGATATTATGTATGGTCTTTGTTCGACAATTTTGAATGGTCTTCAGGTTATACATCACGTTTTGGGATGATCTTCGTGGATTACAAAAATGGTTTGAAGAGATACCAAAAGCTTTCAGCGCAATGGTTCAAGAATTTTCTCAAGAAAGAAAGAAGACTTTATAGCTCTAGTAAATAA 1578 0.3935 MAFKGYFLLGLVTLVLVKSSKVTCEEESVNTVSPIIDISLNRKSFPEGFIFGAGSSSYQFEGAAKEGGRGPSVWDTFTHNYPGKIMDRSNGDMAIDSYHNYKKDVGMMKDMNLDSYRFSISWSRILPKGKLSGGINQEGINYYNNLINELLANGIQPLVTLFHWDLPQALEDEYGGFLSPRIVKDFRDYAELCFREFGDRVKYWVTLNEPWSYSQNGYANGRMAPGRCSAWMNLNCTGGDSSTEPYLVTHHQLLAHAAAVRVYKTKYQASQNGVIGITLVANWFLPLRDTKSDQKATERAIDFMYGWFMDPLTSGDYPNSMRSLVRTRLPKFTAEQSKLLIGSFDFIGLNYYSTTYASDAPDLSEARPSYLTDSLVTPAYERDGKPIGIKIASDWLYVYPRGIRDLLLYTKEKYNNPLIYITENGINEYNEPTLSLEESLIDTFRIDYHYRHLFYLQSAIRNGANVKGYYVWSLFDNFEWSSGYTSRFGMIFVDYKNGLKRYQKLSAQWFKNFLKKERRLYSSSK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1104 525 PRINTS Glycosyl hydrolase family 1 signature 343 357 IPR001360 GO:0004553|GO:0005975
Gso11g1104 525 PRINTS Glycosyl hydrolase family 1 signature 419 427 IPR001360 GO:0004553|GO:0005975
Gso11g1104 525 PRINTS Glycosyl hydrolase family 1 signature 442 453 IPR001360 GO:0004553|GO:0005975
Gso11g1104 525 PRINTS Glycosyl hydrolase family 1 signature 463 480 IPR001360 GO:0004553|GO:0005975
Gso11g1104 525 PRINTS Glycosyl hydrolase family 1 signature 487 499 IPR001360 GO:0004553|GO:0005975
Gso11g1104 525 Gene3D Glycosidases 32 516 - -
Gso11g1104 525 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 3 521 - -
Gso11g1104 525 PANTHER GLYCOSYL HYDROLASE 3 521 IPR001360 GO:0004553|GO:0005975
Gso11g1104 525 Pfam Glycosyl hydrolase family 1 42 517 IPR001360 GO:0004553|GO:0005975
Gso11g1104 525 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Gso11g1104 525 SUPERFAMILY (Trans)glycosidases 40 515 IPR017853 -
Gso11g1104 525 ProSitePatterns Glycosyl hydrolases family 1 active site. 419 427 IPR018120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1104 Gso-Chr11 9886327 9889187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1104 6 519 Glycoside Hydrolase AT5G44640 54.175 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1104 - K01188 gmx:100777247 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0451 12 3971618 3974851 Gso11g1104 11 9886327 9889187 GST