Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0442 ATGACGGTAGCAGCAGGAATGGGTTACGCTCTGCTAGCGTTAGGACCCTCTCTCTCCATCTTCGTTTCTGTCATTTCCAAAAAACCCTTCCTCATTCTCACCGTTCTCTCCAGCACACTGCTGTGGCTTATAAGTTTGATTGTGCTGTCTGGAATATGGAGGGGGGTTTTGCCTCTCAACACAACAGCTTGGTGGCCTTTTGGAATACTCATTTTCTCATCTGTTGCTTTTCAAGAAGCCCTCAGGCTTTTCTCCTGGAAAATATATAAGAGGTTACAAGATATGTTAGATGCCTTTGCTGATAGAATATCAAAACCACATCTTCACCTGACAGATAAGATGCTGATTGCTCTGGCTGGTGGGTTGGGTCATGGTGTTGCCCATGCTGTGTTCTTCTGCATCAGCCTATTAACTCCTGTATTTGGTCCAGCAACATATTTCGTTGACAGGTGTTCAAAAGTTCCATTTTTCCTTCTTTCTGCGATTATTGCTCTTGCATTTGTCACAATCCACACTTTCTCAATGGTCATCGCATTTAATGGGTACTCAGAGGGGAACAAAGTGGATCAATATTTTGTTCCCATTGTTCACGTTGTCGCTGGAATGGTGACTCTGGTGAATTTGGCCCCTGGCGGTTGTGCTTTTGGCATTCCTCTTCTTTATTTGGTTGCAATCTTGACCTTGATTCATTGTGGGAGGATGGTTTGGAGAAAATTGACAGAAAACCCAATCAGGCTGGTTCACTCGTAG 750 0.4413 MTVAAGMGYALLALGPSLSIFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLNTTAWWPFGILIFSSVAFQEALRLFSWKIYKRLQDMLDAFADRISKPHLHLTDKMLIALAGGLGHGVAHAVFFCISLLTPVFGPATYFVDRCSKVPFFLLSAIIALAFVTIHTFSMVIAFNGYSEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAFGIPLLYLVAILTLIHCGRMVWRKLTENPIRLVHS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0442 249 Pfam Aph-1 protein 2 236 IPR009294 GO:0016021|GO:0016485|GO:0043085
Gso12g0442 249 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 241 - -
Gso12g0442 249 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 241 IPR009294 GO:0016021|GO:0016485|GO:0043085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0442 Gso-Chr12 3868592 3872269 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0442 K06172 - gmx:100794637 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0442 12 3868592 3872269 Gso11g1096 11 9798640 9801875 GST