Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1096 ATGACGGTAGCAGCAGGAATCGGTTACGCTCTGGTAGCACTAGGACCCTCTCTCTCCCTCTTCGTTTCCGTCATTTCCAAAAAACCCTTCCTCATTCTCACAGTTCTCTCCAGTACGTTGTTGTGGCTTATTAGTTTGATTGTGCTGTCTGGAATATGGAGGGGGGTTTTGCCTCTCAGCACAACAGCTTCGTGGCCTTTTGGAATACTCATTTTCTCATCTGTTGCTTTTCAAGAAGCCCTCAGACTTTTCTTCTGGAAAATATATAAGAGGTTAGAAGACATGTTAGATGCCTTTGCTGACAGAGTATCAAAACCACATCTTCACCTGACAGATAAGATGCTGATTGCTCTGGCTGGTGGGTTGGGTCATGGTGTTGCCCATGCTGTGTTCTTCTGCATCAGCCTATTAACTCCTGCATTTGGTCCAGCAACGTATTTCGTTGACCGCTGTTCAAGAGTTCCATTTTTCCTTCTTTCTGCAATTATTGCTCTTGCATTTGTCATAATCCACACTTTCTCAATGGTCATCGCATTTAACGGGTATACAGAGGGGAACAAAGTGGATCAATATTTTGTTCCCATCGTTCACGTTGTTGCTGGAATGGTGACTCTGGTGAATTTGGCGCCTGGCGGTTGTGCTGTTGGCATTCCTCTTCTTTATTTGGTTGCAATCTTGACCTTGATTCATTGTGGGAGGATGGTTTGGAGAAAATTGACAGAAAACCCAATCAGGCCAGTTCACTCATAG 750 0.4453 MTVAAGIGYALVALGPSLSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLSTTASWPFGILIFSSVAFQEALRLFFWKIYKRLEDMLDAFADRVSKPHLHLTDKMLIALAGGLGHGVAHAVFFCISLLTPAFGPATYFVDRCSRVPFFLLSAIIALAFVIIHTFSMVIAFNGYTEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPLLYLVAILTLIHCGRMVWRKLTENPIRPVHS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1096 249 Pfam Aph-1 protein 2 233 IPR009294 GO:0016021|GO:0016485|GO:0043085
Gso11g1096 249 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 241 - -
Gso11g1096 249 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 241 IPR009294 GO:0016021|GO:0016485|GO:0043085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1096 Gso-Chr11 9798640 9801875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1096 K06172 - gmx:100783660 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1096 11 9798640 9801875 Gso11g1096 11 9798640 9801875 ECH
Gso12g0442 12 3868592 3872269 Gso11g1096 11 9798640 9801875 GST