Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0429 ATGCGCACTTTTTCATTTGCATTTAAGAAGGGGTTTTGGGAAATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCTGCCACAAGTTGCATCATAGGAATATGCAGCATGATTTGGTTCTACATACAGAAGAAAAATATTGGGTATTCACATGTGGGTCTGAGTTATGAGACCGCTGTAGAAGGGCATCATTGGAGGATAATTACTTCTGCTTTTTCTCATATTAGTGTTATTCATCTTGTTTTTAATATGAGTGCACTTTGGAGTCTTGGGGTGGTAGAGCAGCTTGGTCACTTGGGCCTTGGTGTTGAGTACTACTTGCAGTACACACTTGTGTTGGTTGTTCTATCAGGAGTGCTGGTTCTTGCAATGTATCATTTGTTGATTCAAAGGTTCAAGCTTGAGTATTTTCGTCGAGTGACGGCTGTTGGGTATTCCTGTGTTGTTTTTGGGTGGATGACAATTCTTTCTGTGAAGCAACCATCTTCCAAGTTGGATCTCTTTGGTTTTCTTTCTCTTCCTATCAGTTTTGCGCCGTTTGAATCGCTTATTTTCACTTCGATCATTGTTCCTCAGGCGAGTTTTCTTGGCCATTTATCGGGCATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGGATGAGCAATTACTGGGCACTTTCCTTGTTGGGATGGATTGCGCTTGTCTTTGTTTTGAGTTTGAAGAGATCTGGTGCCGTTGACCTAAACTTTCTTGAGATTGAATCTGTTACAGATCCTTCCCTACCATCTGTGCGGTTTTTGGCATCAAACAGTGGCAGAACACTGCAGATGAGTGCGTTGCCAAATGGAAATGTTGAAATTGTCTAA 858 0.4149 MRTFSFAFKKGFWEMGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVTDPSLPSVRFLASNSGRTLQMSALPNGNVEIV* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0429 285 Gene3D - 24 215 IPR035952 -
Gso12g0429 285 PANTHER RHOMBOID PROTEASE 15 285 - -
Gso12g0429 285 SUPERFAMILY Rhomboid-like 27 213 IPR035952 -
Gso12g0429 285 PANTHER RHOMBOID-LIKE PROTEIN 13 15 285 - -
Gso12g0429 285 Pfam Rhomboid family 62 215 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0429 Gso-Chr12 3742875 3744443 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0429 - - gmx:100818954 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0429 12 3742875 3744443 Gso11g1081 11 9669552 9671070 GST