Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1081 ATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCTGCCACAAGTTGCATCATAGGCATATGTAGCATGATTTGGTTCTACATACAGAAGAAAAATATTGGGTATTCACATGTGGGTCTCAGTTATGAGACTGCTCTAGAAGGGCATCATTGGAGGATAATTACTTCTGCTTTTTCTCATATTAGTGTTATTCATCTTGTTTTTAATATGAGTGCACTTTGGAGTCTTGGGGTGGTAGAGCAGCTTGGTCACTTGGGTCTTGGTGTTGAGTACTACTTGCAATACACACTTGTGTTGGTTGTTCTATCAGGAGTGCTGGTTCTCGCAATGTATCATTTGTTGATTGAAAGGTTCAAGCTTGAGTATTTTCGCCGAGTGACGGCTGTTGGGTATTCCTGTGTTGTTTTTGGGTGGATGACAATTCTTTCTGTGAAGCAACCATCTTCCAAGTTGGATCTCTTTGGGTTTCTTTCTCTTCCTATCAGTTTTGCACCGTTTGAATCACTTATCTTCACTTCGATCATTGTTCCTCAGGCGAGTTTTCTTGGCCATTTATCGGGGATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGGATGAGCAATTACTGGGCACTTTCCTTGTTGGGATGGATTGCACTTGTCTTTGTTTTGAGTTTGAAGAGATCTGGCGCGGTTGACCTAAACTTTCTTGAGATTGAATCTGTTACGGATCCTTCCTTACCCTCTGTGCGGTTTTTGGCATCAAACAGTGGCAGAACACTGCAGATGAGTGCATTGCCAAATGGAAATGTTGAAATTGTCTAA 816 0.4154 MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETALEGHHWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIERFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVTDPSLPSVRFLASNSGRTLQMSALPNGNVEIV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1081 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Gso11g1081 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
Gso11g1081 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Gso11g1081 271 Gene3D - 10 199 IPR035952 -
Gso11g1081 271 PANTHER RHOMBOID PROTEASE 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1081 Gso-Chr11 9669552 9671070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1081 - - gmx:100778645 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1081 11 9669552 9671070 Gso11g1081 11 9669552 9671070 ECH
Gso12g0429 12 3742875 3744443 Gso11g1081 11 9669552 9671070 GST