Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0426 ATGGGGTTGGAATCGGTGGGAGATTTAGCGATTAACGTGATTCTGAAAAAATTAGGAGCCCAAGACATTGCGAGAGTGGCGTGTGTGAGCAAAAGGTTCAGTTCTTCCGCTTCCGATGACACTCTTTGGATCAATCTCTGCTTCAATGAACTCGCTTTGACACAACCCCTCGATCATCTCGGAAACCCTCTCTCTTCCTTCAAGGAATGCTATCTAGCATGGAGAGGAGCTTTTGTTATGTACCCTTGGTCTCTTGTTAAGCGTGTAAAAAGGTGCTGGGATAGAATAAAAACCTGGTTGACCAATCATTTTCCTGAAGCGGAGGCCACTCTTTGTAAAGGTGCAACTGAAGCTGACATTCAGGAGTTGGAGAATGTATTAAAGGTGAAATTGCCTCTTCCTACAAGGATCCTTTATCGCTTTCACAATGGGCAAGAATTTGCAAAGGCAGATCCAGAAACTAGTACATTTGGCAGATCTTTGGGTCTAATTGGTGGCTACTCCTTCTATGGTCATTTGGTGAATGTTTATCTATTACCTATATGTCAGATAATCCTAGAAACTCAGCAAACTAGGCGTCGCTTGAGCTTTTTAAGAAGATCAAAGTATGTTCTTGTGGCTGCTTCATCCACATACAGTAGAAAGTTGTTTTTCCTCAACTGTACCAATGGTCAACTATATGTCGGGACCAGGTCTCCTCTTACCGAAAGAGACATAATCCCTTGTGTACCTCATGACCTGATTAGTTTACATCAGGAATTGAATAGTTCAGAGCAACAAGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGCCGTTTAGAACACGGCTTTATCAAACTTCATGATGAAGGAAATGGCAAAAGCATTAATCTTTTCCCAGAAGAACCCCATATTTGTTCAACGGCTGTTACTAATGGTGTGAAGGTTCGCGCTTCTGCACTGGTTATCCCTGAGTTGATGGATCTTCAAGATGACCTTGGAGAGTACTTATTTGCTTATTCAATCCGCTTGTCCCTTGAACCTCAAGGATGCATTATTAATGGAATGTCCTTCAGCTCTTGCCAGCTCCATTGGAGGCACTGGATCATCCGTGCTAATGATATTGTTATATCTGATGTCAATGGAAAAGCTGTTATAGGACAGTTTCCACTTTTGCGTCCGGGTGCTCAAGAATTTGTTTATCAGAGTTGCACGCCTCTACCAACACCATCAGGTTCTATTGAAGGTTCTTTTACATTTATACCCGGCAGATTGGCAGACCCAAAAGGAGACCCTTTTCTAGCTACAGTGGCTCGTTTCCCGCTCCAGCTGCCAGACTATATATTCTGA 1332 0.4302 MGLESVGDLAINVILKKLGAQDIARVACVSKRFSSSASDDTLWINLCFNELALTQPLDHLGNPLSSFKECYLAWRGAFVMYPWSLVKRVKRCWDRIKTWLTNHFPEAEATLCKGATEADIQELENVLKVKLPLPTRILYRFHNGQEFAKADPETSTFGRSLGLIGGYSFYGHLVNVYLLPICQIILETQQTRRRLSFLRRSKYVLVAASSTYSRKLFFLNCTNGQLYVGTRSPLTERDIIPCVPHDLISLHQELNSSEQQDAMLLWLEEHGRRLEHGFIKLHDEGNGKSINLFPEEPHICSTAVTNGVKVRASALVIPELMDLQDDLGEYLFAYSIRLSLEPQGCIINGMSFSSCQLHWRHWIIRANDIVISDVNGKAVIGQFPLLRPGAQEFVYQSCTPLPTPSGSIEGSFTFIPGRLADPKGDPFLATVARFPLQLPDYIF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0426 443 Gene3D - 8 99 - -
Gso12g0426 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Gso12g0426 443 Pfam ApaG domain 324 415 IPR007474 -
Gso12g0426 443 SUPERFAMILY SMI1/KNR4-like 92 196 IPR037883 -
Gso12g0426 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Gso12g0426 443 Gene3D ApaG domain 299 443 IPR036767 -
Gso12g0426 443 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Gso12g0426 443 SUPERFAMILY F-box domain 13 73 IPR036047 GO:0005515
Gso12g0426 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Gso12g0426 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0426 Gso-Chr12 3721682 3726008 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0426 K10290 - gmx:100809876 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0426 12 3721682 3726008 Gso11g1078 11 9637200 9641219 GST