Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0424 ATGGCAGTGGAAGACCGGTTCGCGAATTTGAACCCTAAGACGTGTGTGGTTTTAGGCGGCAGAGGATTCGTTGGAAGATCGTTGGTGCTGAGGCTGTTGAAACTCGGTAACTGGATCGTCCGAATCGCCGATTCCGCTCAGTCTCTCCAACTCCACCACTCCGAGTCTCTCCTCCAACAAGCTCTCTCTTCTTCTTCTCGCGCTTCTTACTTCCACGTCGACCTTCGCGATAAACGGAGCATTATCAAAGTTCTACAAGGTTCCTCTGTTGTCTTTTATTTGGATATTGCTGGCGTCGATGGGAATGACTTTTATACTTGCTATAAGCTTATAGTTCAAGGTGCAAAGAATGTCATTAGTGTTTGCCGCGAATGTAGAGTGAAACGCCTGATATATAACAGTTCTGCTGATGTTGTATTTGATGGTTTGCATGATATTCGCGATGGAGATGAATCGTTGGCGTATCCGTGGAAAACTGACAACATGTTAAGTGACCTTAAGGCTCAAGCGGAAGCTTTGATCCTGAGTGCCAATGACATTGATGGCCTATTGACATGCTCTCTTCGTCCTAGTAATGTTTTTGGACCTGGTGACACGGAATTTGTGCCATATTTTCTCAAATTAGCAAGATATGGTTTTTCAAAGTTTATCATAGGGACTGGTGATAATCTTTCAGATTTCACATTTTCTGAAAATGTTACTCATGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAATGGTTTCTGCGGCTGGAAAGGCATTTTTCATCACAAATCTTGAGCCTATGAAATTCTTGGAATTTCTCTCGCTTTTGTTAGAAGGTCTTGAATATCAAAGGCCATTCATCAAACTTCCTGCTAAGTTGGTACAATATATTCTATCAGTTTTAAAGTGGGTACATAAAAAGTTGGGGCCCAGATACTTCAGTTATCCTTTATTAGTTCACTTTTTTCAGTTAGCTTCATACACCCGAACTTTCAACTGCATGGCAGCTCAGAAAGATATTGGATACTCACCAATAGTCTCCCTTGAGGAAGGAGTCACATTAACCATAGAGTCATTCTCTCATTTAGCCAGAGACTCATCTTTTCCAAGATGCTGCAGTTTCACTGAACAGTCAAAAGCGGATAAGCTGCTGGGTGGTGGAAAAGTGGCTGACATTTTGTTGTGGAGAGACGAGAAGAAATCCTTTGCATATTTCCTTGTGCTGGTTTTGTTGTTTTACTGGTCTTTCCTTTCTGGAAGAACTTTTATATCATCTGCTGCGAGACTTTTGCTGCTTGCCACATTACTTTTATATGGACATGGTTTTCTGCCATCAAAGTTATTTGGTTTTCACATACAAAGGATACCCACGTCTTATTTTGAGATCTCTGATACGACAGTCAAAGATTCAGTTACCACTACAGTATATCTTTGGAACCGGGGTTTTCAAAATATAAGAGGACTGGCCCAAGGGGACAATTGGTCTGCATTTTTCAAGATTGCAGTTTTTCTTTACCTTCTGAAGTTGATCCTGTCAGAGTTGTTCACGAAAATGATAGGCATAGGTTTGGTGATCGCATTTATGGCATTTTTTGTTTACGAGCAATATGAATCCGAAATTGATGGATTGGTGGATTTTCTGTTCACCAGTTTGAAGGAGTTCATGATATATTTGATGAGAATTTCACCTGTTTCTATATTGCGGCTTCTGCATTATCACGACAATTTTCAGCGCTATGAAGGACCAAGAAAGGTAAAAGACCTGAGATAA 1761 0.4077 MAVEDRFANLNPKTCVVLGGRGFVGRSLVLRLLKLGNWIVRIADSAQSLQLHHSESLLQQALSSSSRASYFHVDLRDKRSIIKVLQGSSVVFYLDIAGVDGNDFYTCYKLIVQGAKNVISVCRECRVKRLIYNSSADVVFDGLHDIRDGDESLAYPWKTDNMLSDLKAQAEALILSANDIDGLLTCSLRPSNVFGPGDTEFVPYFLKLARYGFSKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQMVSAAGKAFFITNLEPMKFLEFLSLLLEGLEYQRPFIKLPAKLVQYILSVLKWVHKKLGPRYFSYPLLVHFFQLASYTRTFNCMAAQKDIGYSPIVSLEEGVTLTIESFSHLARDSSFPRCCSFTEQSKADKLLGGGKVADILLWRDEKKSFAYFLVLVLLFYWSFLSGRTFISSAARLLLLATLLLYGHGFLPSKLFGFHIQRIPTSYFEISDTTVKDSVTTTVYLWNRGFQNIRGLAQGDNWSAFFKIAVFLYLLKLILSELFTKMIGIGLVIAFMAFFVYEQYESEIDGLVDFLFTSLKEFMIYLMRISPVSILRLLHYHDNFQRYEGPRKVKDLR* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0424 586 Pfam Reticulon 386 542 IPR003388 -
Gso12g0424 586 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 287 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gso12g0424 586 ProSiteProfiles Reticulon domain profile. 386 551 IPR003388 -
Gso12g0424 586 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 358 IPR036291 -
Gso12g0424 586 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 492 - -
Gso12g0424 586 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 11 492 - -
Gso12g0424 586 Gene3D - 5 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0424 Gso-Chr12 3699515 3705574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0424 13 363 Lipid Metabolism Gene Families AT2G33630 30.239 6.64e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0424 K23558 - gmx:100794808 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0424 12 3699515 3705574 Gso11g1076 11 9615978 9621716 GST