Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0423 ATGAGTGATGCGAAGGAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGGAAAGGTCTTCTGTATGGATTTATGCGATTATTTTCAATACCATTAAAAACATTGCGCGGAGCTAGTCGGTCGTTGAGAGTGGATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGGTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACGGGGACAGTTGGTGTTGTTGATCCTTCCGAAGCTGCGCCTATCATAGATGCGTTGAGCAAGAAAGATTTAAATTTGACTTACATACTGAACACCAACCACCATCCTGATCACACTGGTGGAAATGCAGAGTTGAAAGAAAGGTATGGGGCAAAGGTAATTGGTTCAGAAATAGACAAGGAAAGAATTCCTGGTATTGATATCTATTTGAGTGATGGTGATAACTGGATGTTCGCAGGCCATGAAGTGCATATATTGGCCACACCTGGTCACACCGAAGGTCATGTAAGCTTCTACTTTCCAGGTTCTGGGGCAATTTTTACTGGCGACACCTTGTTCAGCTTATCATGTGGCAAGCTCTTAGAAGGAACCCCCGAACAGATGCTATCTTCTCTTAAAAGGATCATGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTGAACAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAATCCTATGCTACCCATGTATCTAACCTTAGAAATAAAGGCTTGCCCACGATTCCAACTACGCTGAAAGTGGAAAAGGCTTGCAATCCATTCCTTCGCACATGGAGCATAGAAATCCGGCAAAAACTAAATATTGCAGCCACGGCAGATGATGCAGAAGCCCTGGGTGTTATCCGGCAAGCAAAGGATAATTTTTAG 948 0.4219 MSDAKERSGFCVWPDARQLCLRKGLLYGFMRLFSIPLKTLRGASRSLRVDQFCSVVNLSSSLQIELVPCLRDNYAYLLHDVDTGTVGVVDPSEAAPIIDALSKKDLNLTYILNTNHHPDHTGGNAELKERYGAKVIGSEIDKERIPGIDIYLSDGDNWMFAGHEVHILATPGHTEGHVSFYFPGSGAIFTGDTLFSLSCGKLLEGTPEQMLSSLKRIMSLPDDTSIYCGHEYTLNNSKFALSIEPENKELQSYATHVSNLRNKGLPTIPTTLKVEKACNPFLRTWSIEIRQKLNIAATADDAEALGVIRQAKDNF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0423 315 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 230 IPR035680 -
Gso12g0423 315 PANTHER BETA LACTAMASE DOMAIN 4 315 - -
Gso12g0423 315 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 315 IPR017782 GO:0004416|GO:0019243
Gso12g0423 315 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 315 IPR036866 -
Gso12g0423 315 SMART Lactamase_B_5a 72 230 IPR001279 -
Gso12g0423 315 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 65 315 IPR017782 GO:0004416|GO:0019243
Gso12g0423 315 PIRSF Glx 57 315 IPR017782 GO:0004416|GO:0019243
Gso12g0423 315 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 4 315 - -
Gso12g0423 315 Gene3D - 62 315 IPR036866 -
Gso12g0423 315 Pfam Hydroxyacylglutathione hydrolase C-terminus 231 315 IPR032282 -
Gso12g0423 315 Pfam Metallo-beta-lactamase superfamily 76 230 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0423 Gso-Chr12 3694669 3698681 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0423 K01069 - gmx:100805615 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0423 12 3694669 3698681 Gso11g1075 11 9610409 9614503 GST
Gso15g0257 15 2337853 2341476 Gso12g0423 12 3694669 3698681 PCT
Gso11g3548 11 51263977 51267711 Gso12g0423 12 3694669 3698681 PCT
Gso12g0423 12 3694669 3698681 Gso15g0257 15 2337853 2341476 PCT
Gso12g0423 12 3694669 3698681 Gso11g3548 11 51263977 51267711 PCT