Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3548 ATGCTGCATATGTTCTCTAAGGCTTCTTCTGCTATGGCCACTTTTCCTTGTTCCAGGGTGAAAAGTGGGTTGTGCGTGTGGCCAGATGTGAGACAACTTTGCTTTAGAAAAGGCATGCTATATGGATTTATGCGGTTGTTTTCTACACCGTTGAAAACGCTCCGTGGAGCTAGCCGCTCGCTGAGAGTGACTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTGGTACCTTGCCTGAAGGACAATTATGCTTATCTGTTACATGATGTGGACACGGGTACAGTTGGTGTTGTTGATCCTTCTGAAGCTGTGCCTATCATAGATGCCTTGAGCAGGAAAAATCGAAATTTGACATACATACTCAACACTCACCATCATCATGATCACACGGGTGGAAATGTAGAATTGAAAGCAAGATATGGGGCAAAGGTGATTGGTTCAGGAACTGACAAGGAAAGGATTCCTGGCATTGATATCCACTTGAATGATGGAGATAAGTGGATGTTTGCTGGCCATGAGGTGCGTGTAATGGACACGCCTGGTCATACCCGAGGCCATATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACTGGAGACACTTTGTTTAGCTTATCATGTGGCAAGCTCTTTGAAGGAACCCCACAGCAGATGCTATCTTCTCTTAAAAAGATCATGTCTTTGTCAGATGATACAAATATATACTGTGGACACGAGTATACATTGAATAATATAAAGTTTGCATTGTCTATCGAACCTGAAAACGAGGAGCTTCAATCCTATGCTGCCCAAGTAGCTTACCTTCGAAGTAAAGGCCTACCCACGATTCCCACCACACTGAAGGTGGAAAAGGCTTGTAATCCATTCCTTCGTACATCCAGTGCTGCAATCCGGCAATCACTAAAGATTGCAGCCACAGCAAATGATGCAGAAGCCCTTGGTGTCATCCGGCAAGCAAAGGATAATTTTTAG 990 0.4374 MLHMFSKASSAMATFPCSRVKSGLCVWPDVRQLCFRKGMLYGFMRLFSTPLKTLRGASRSLRVTQFCSVANMSSSLQIELVPCLKDNYAYLLHDVDTGTVGVVDPSEAVPIIDALSRKNRNLTYILNTHHHHDHTGGNVELKARYGAKVIGSGTDKERIPGIDIHLNDGDKWMFAGHEVRVMDTPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPQQMLSSLKKIMSLSDDTNIYCGHEYTLNNIKFALSIEPENEELQSYAAQVAYLRSKGLPTIPTTLKVEKACNPFLRTSSAAIRQSLKIAATANDAEALGVIRQAKDNF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3548 329 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 79 329 IPR017782 GO:0004416|GO:0019243
Gso11g3548 329 CDD hydroxyacylglutathione_hydrolase_MBL-fold 81 244 IPR035680 -
Gso11g3548 329 PANTHER BETA LACTAMASE DOMAIN 4 329 - -
Gso11g3548 329 Hamap Hydroxyacylglutathione hydrolase [gloB]. 76 329 IPR017782 GO:0004416|GO:0019243
Gso11g3548 329 Gene3D - 76 329 IPR036866 -
Gso11g3548 329 SUPERFAMILY Metallo-hydrolase/oxidoreductase 76 329 IPR036866 -
Gso11g3548 329 SMART Lactamase_B_5a 86 244 IPR001279 -
Gso11g3548 329 Pfam Hydroxyacylglutathione hydrolase C-terminus 245 329 IPR032282 -
Gso11g3548 329 Pfam Metallo-beta-lactamase superfamily 90 244 IPR001279 -
Gso11g3548 329 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 4 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3548 Gso-Chr11 51263977 51267711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3548 K01069 - gmx:100816314 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0257 15 2337853 2341476 Gso11g3548 11 51263977 51267711 GST
Gso11g3548 11 51263977 51267711 Gso12g0423 12 3694669 3698681 PCT
Gso11g3548 11 51263977 51267711 Gso11g1075 11 9610409 9614503 PCT
Gso12g0423 12 3694669 3698681 Gso11g3548 11 51263977 51267711 PCT
Gso11g1075 11 9610409 9614503 Gso11g3548 11 51263977 51267711 PCT