Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0421 ATGGCAAATCTTGTTCCTGGGGTGCTTCTCAAACTTATGCAGCACATGAACACAGACGTGAAAGTAGCTGGTGAGCACAGGTCCTCGTTGCTGCAAGTTGTGAGCATTGTTCCAGCACTTGCAGGGGGTGAGTTGTTCCCAAATCAAGGATTTTATCTCAAGGTTTCTGATTCCTTGCATGCCACCTATGTCTCTCTCCCTGATGAACATGATGATCTCATCCTCAGTGACAAGATTCAACTGGGGCAGTTTGTTTTCGTGGATCGTTTGGAGGCAGCTTCACCAGTTCCTATTCTTCATGGGGTTAGGCCTGTTCCTGGGAGACACCCTTGTGTTGGAACCCCTGAGGACATTGTTGCAACAACTCACTCACTTGGGTTCCTTAGTAACGGCAAGGCTAACAAGAAAAGTCCTTGTTCTGGACCCTTGGACTTAGAGAGGTCCAAGTCTCCGAGGAAAGTGTTGAGCAATCACCATGTTGGGGAGAAGGAGAAGAAGGAGAAAGTGAGATTGAATAATGAAGATCAATTAGACAAGAAAGCAATGCTGTTTGCTAAGAGTAAATCTCAGACAACAAAAGCAGCAGCAGCTAATGTTGCTGATGCGAAGAAGGAACCGTTGGCGAGATGGAAGTCATTGAATTCAAGGACCATTCCTTCTTCCCCCACTAGTTGCTATTCCTTGCCTACTTCTTTTGAGAAATTTGCCAATGGGGTCAAGCAGCAGGCAAATATCAAGGGAGTGGACAGGCTAACTGCTAAGGTGGGAGTGGTGGAGATAGGAAAGGGTGTCCGTGGAACCAGTCCAACCGGGAAGAGAATTTCCGTGGGAAACCCGATCAGAAATTTGGTTCAGGGAATTGAGCTTGGAGCTAAGGCGCTGCGTAAGAGCTGGGAAGGGAATATGGAAGTCAAGAAGAAAGATACATCCAAATTAAGGGCCGCCAAGTGTGATCCTAAGCCAGAGGTTCGTGGCTCAACTCCTAGGAGAAGTACTTCAAGTGAAAAGTTGCCCTCTAAAGAAGAGAGCAAGATGCAACCGCAGACAAAGTCCTCCAAGGAAGAGCACAAGACTCAAACATCTATAAAGAGAGTTATTGTCAGTGGAACAATGGAGGAACAAGAAAAACCAAGTAAGCAAAGAGTTCCTGTTGGAAAGAAATTGTCAGAAGCTTCTAACAATGGATTCCCTGGAAACTTGGTCAAAGTTTCTCCAAGTAGTAGAAAAGTGACAGATGCAAGTGTTCCATGGGCTTCACTCCCGTCATCTATTGCAAAGCTTGGGAGGGAAGTGATGAAGCAAAGAGATGCCGCACAGATGGCTGCAACTGAGGCTATACAAGAGGCTGCTGCTGCTGAGAGTTTGCTGCAATGTCTAAGTGTATACGCAGAGCTTAGTAATTCTGCTAAGGAACAAAACCCGCAGCCTGCAGTAGAGGAGTTCCTAACTCTTCATGCTAGCCTAAATAGTGCACGGATGATTGCTGACTTGCTATCTAAATCCAATCCAGATGATTCTTCTTCAGATAATGAAAGAAGCATAACAGAAGAGGCACTAAAACTCAAACTAGATAGACAAAGGCGTGCAAATTCTTGGGTCCAGGCTGCTTTATCCACCAATCTATCATCCTTTTCTATTTATAACCACGAACCTCTATCATCCAAGCTTCCAGTTTCAACCAATTCTCAAAACCAAAAGAATATCCTGGGAAGTAAACCAATGCTAGTCATGGAAAATTCAAGTGAAGATTCATCAAAATCTCATGGAAAAACCCGTCAGACGGCTAATTCCAAAACTCCTCACAAAACAGGTGATATGCTAGCAAATGGACACAAGCAACTAGTCCAATCACCGCCAGAGTGGGTTAGAGGAAATGGCCTTGATGAGGTGGTTGATTTGGCTGACATGCTGCAACTGCGGTCACGAGATTGGTTTTTGGTGTTTGTTGAGAGATTCTTGGACCCTGATGGGGACACTAGCTTGTCAAATAATGGTCAAATAGCAGGTATGCTCACTCAACTGAAAAGTGTGAATGATTGGCTTGATGAGATAGGATCAAGCAAGAATGAGGGAGAACCTTGCCAGATACCAGCAGAGACAATTGACAGGCTGAGGAAGAAGATATATGAATATCTTCTTACACACGTTGAATCCGCCGCCGCTGCACTCACTGGTGGATCACAATCATCACCTAGAATCCAAACAGCAGAGATCAAAGCCAAAAAGTGA 2229 0.4495 MANLVPGVLLKLMQHMNTDVKVAGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSLHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPVPGRHPCVGTPEDIVATTHSLGFLSNGKANKKSPCSGPLDLERSKSPRKVLSNHHVGEKEKKEKVRLNNEDQLDKKAMLFAKSKSQTTKAAAANVADAKKEPLARWKSLNSRTIPSSPTSCYSLPTSFEKFANGVKQQANIKGVDRLTAKVGVVEIGKGVRGTSPTGKRISVGNPIRNLVQGIELGAKALRKSWEGNMEVKKKDTSKLRAAKCDPKPEVRGSTPRRSTSSEKLPSKEESKMQPQTKSSKEEHKTQTSIKRVIVSGTMEEQEKPSKQRVPVGKKLSEASNNGFPGNLVKVSPSSRKVTDASVPWASLPSSIAKLGREVMKQRDAAQMAATEAIQEAAAAESLLQCLSVYAELSNSAKEQNPQPAVEEFLTLHASLNSARMIADLLSKSNPDDSSSDNERSITEEALKLKLDRQRRANSWVQAALSTNLSSFSIYNHEPLSSKLPVSTNSQNQKNILGSKPMLVMENSSEDSSKSHGKTRQTANSKTPHKTGDMLANGHKQLVQSPPEWVRGNGLDEVVDLADMLQLRSRDWFLVFVERFLDPDGDTSLSNNGQIAGMLTQLKSVNDWLDEIGSSKNEGEPCQIPAETIDRLRKKIYEYLLTHVESAAAALTGGSQSSPRIQTAEIKAKK* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0421 742 PANTHER EXPRESSED PROTEIN 1 741 IPR010341 -
Gso12g0421 742 MobiDBLite consensus disorder prediction 146 168 - -
Gso12g0421 742 MobiDBLite consensus disorder prediction 302 325 - -
Gso12g0421 742 PANTHER DUF936 FAMILY PROTEIN 1 741 - -
Gso12g0421 742 MobiDBLite consensus disorder prediction 302 404 - -
Gso12g0421 742 MobiDBLite consensus disorder prediction 334 361 - -
Gso12g0421 742 Pfam Plant protein of unknown function (DUF936) 4 723 IPR010341 -
Gso12g0421 742 MobiDBLite consensus disorder prediction 579 604 - -
Gso12g0421 742 MobiDBLite consensus disorder prediction 131 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0421 Gso-Chr12 3677069 3682356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0421 - - gmx:100805079 1378.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0421 12 3677069 3682356 Gso11g1073 11 9593334 9598983 GST
Gso15g0256 15 2323792 2328750 Gso12g0421 12 3677069 3682356 PCT
Gso11g3549 11 51273420 51278770 Gso12g0421 12 3677069 3682356 PCT
Gso12g0421 12 3677069 3682356 Gso15g0256 15 2323792 2328750 PCT
Gso12g0421 12 3677069 3682356 Gso11g3549 11 51273420 51278770 PCT