Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3549 ATGGCGAATCTGGTTCCGGGGGTGCTTCTGAAGCTTCTTCAGCACATGAACTCGGATGTGAAGGTTGGTGGCGAGCACAGGTCTTCGCTTTTGCAAGTTGTGAGCATTGTTCCGGCACTTGCAGCAGGGGGTGAGCTTTTCCCAAACCAAGGTTTTTATCTCAAGGTCTCTGATTCCTCTCATGCTACCTACGTGTCACTCCCTGATGAGCATGATGATCTCATTCTCAGTGATAAGATTCAGTTGGGTCAGTTTGTGTTTGTTGATCGCTTGGAGGGTGCTTCTCCCGTTCCCATTCTCAGAGGGGTTAGGCCTGTTCCTGGGAGACACCCTTGTGTTGGAACCCCTGAGGATATTGTTGCAACTCATTCCCTTGCTTTCCTCGATAATGGTAATGACAAAAATGGGGCTTGTTCTGGTGGGGGTGACGTGGATAGGTCCAAGTCTCCGAGGAAGGTGTTTGGTGGTGGGGTTGGGGAGAAGGAGAAGAAGGAGAGAGTGAGATCAATTGTTGTTGGTGGTGGTGGGAGTGGTAAAGAGGATGTGCAATCCAGCAAGGCAAGTGCTGTTTTCGGTAGGAGCAAATATCAGCCTCAGCAACCACAGCCAATCAAGCCTGCACTCAAGATTCAGGTCAAGAAGGAATCCTTGGCTAGATTGAAGTCAACCAATTCGCGGTCCATTCCTTCGTCGCCGAGTAGTTGCTACTCGTTGCCGAGTTCTTTTGAGAAATTTGCCAATGGGGTCAGGCAGCACCAGGGAAAGGTTGGGGCTAAGGTGGGAGTGGCGGAGACGGAAAAGGCTGTTCGTGGGGCTAGTAGTTTGGTTGGGAAGAAAATTGTGGTGGGAAATCCGATTAGAAATTTGGTGCAGGGAATTGAGCTGGGGACAAAGGCTCTAAGGAAGAGCTGGGAAGGGAGTATGGAGGTCAAGACTAAAGAGTCTTCCAAAACCAGGGTTGCAACCAAGTTTGATTCTAAGCCTGAAGCAAGTACGCCTAGGAGGAGAAGCATTTCAACTGAAAAGTTTCTATCTAAAGAGGAGAGCAGGATCCAAGCACCAACAAAGCCCTCTAAGGAACAACATAAGATTCAAACATCTACAAAGAAGGCTAATGCTAATGGAACTGTGGAGGAACCAGAAAAGTCTAGTAAGCTAAGAACTTCCATTGGAAAGAAATCAGCTGAAGTTTCTAACAGCGGACTCCCTGGAAACTTGGTCAAAGTTTCTCTAAGTAATAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTCCCATCATCTATTTCAAAGATTGGAAGGGAAGTAATGAAACACAGAGATGCGGCACAGATAGCAGCAACTGAGGCTATGCAAGAGGCTGCTGCTGCTGAGAGTTTACTGCAATGTCTAAGAACATATTCAGAGCTAACTAATTCTGCTAAGGAACATAACCCACAGCCAGCAGTAGAGCAGTTTTTAACTCTTCATGCTAGCCTGAATAGTACCCGGACAATTGCTGAATCCTTGTCAAAACCCATTCCAGATGGTTCATCTCCAGATTATGAAAGGAGCACAGTGGAAGAAGCTCTAAAAGTAAAATCAGATAGACAAAAACAATCGGCTTCCTGGGTCCAGGCAGCCTTGGCCACCAATTTGTCATCATTTGCTGTTTTTACAAGAGAATCTCAATCATCCAAGCTTCCAGCTTCAAGCAATTCTCAAAATCAAAAGACTGTTGTGGGAAGTCAACACATGTTAGTCCTACACAATTCCAGTGAAGATGCTTCATCAAAAGTTCATGCAAAAACTCGTCTGACAGCTAATTCCAAGCATTCCTCACAAGGAACTCTTCGCAAACCAGGTGATGGGTTATTAAATGGTCAGAAGCAACTAGTGCAACTTCCCCCAGAATGGGTTAGAGGAAATGGTCTCAATGAGGTAGTTAATTTGGCTGAAATGTTACAGTTAGAGTCCCGAGACTGGTTTTTGGGATTTGTTGAGAGGTTCTTGGACAGTGATGGGGACACTACCTTGTCAGATAATGACCAAATAGCAGGTATGCTCACTCAACTAAAGAGTGTTAACGATTGGTTAGATGAGATAGGATCGAGCAAGGATGAGGGAGAATCATGCCAGATATCAACAGAGACAATTGACCGGTTGAGAAAGAAGATATATGAATATCTTCTTACACATGTTGAATCTGCTGCTGCTGCACTCAGTGGTGGATCACAATCGTCACCTCAGATCCAAACAACACAAAGTAAAGCCAAAAGGTGA 2265 0.4547 MANLVPGVLLKLLQHMNSDVKVGGEHRSSLLQVVSIVPALAAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEGASPVPILRGVRPVPGRHPCVGTPEDIVATHSLAFLDNGNDKNGACSGGGDVDRSKSPRKVFGGGVGEKEKKERVRSIVVGGGGSGKEDVQSSKASAVFGRSKYQPQQPQPIKPALKIQVKKESLARLKSTNSRSIPSSPSSCYSLPSSFEKFANGVRQHQGKVGAKVGVAETEKAVRGASSLVGKKIVVGNPIRNLVQGIELGTKALRKSWEGSMEVKTKESSKTRVATKFDSKPEASTPRRRSISTEKFLSKEESRIQAPTKPSKEQHKIQTSTKKANANGTVEEPEKSSKLRTSIGKKSAEVSNSGLPGNLVKVSLSNRKVTDASVQWASLPSSISKIGREVMKHRDAAQIAATEAMQEAAAAESLLQCLRTYSELTNSAKEHNPQPAVEQFLTLHASLNSTRTIAESLSKPIPDGSSPDYERSTVEEALKVKSDRQKQSASWVQAALATNLSSFAVFTRESQSSKLPASSNSQNQKTVVGSQHMLVLHNSSEDASSKVHAKTRLTANSKHSSQGTLRKPGDGLLNGQKQLVQLPPEWVRGNGLNEVVNLAEMLQLESRDWFLGFVERFLDSDGDTTLSDNDQIAGMLTQLKSVNDWLDEIGSSKDEGESCQISTETIDRLRKKIYEYLLTHVESAAAALSGGSQSSPQIQTTQSKAKR* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3549 754 MobiDBLite consensus disorder prediction 138 160 - -
Gso11g3549 754 PANTHER DUF936 FAMILY PROTEIN 1 753 - -
Gso11g3549 754 MobiDBLite consensus disorder prediction 587 621 - -
Gso11g3549 754 PANTHER EXPRESSED PROTEIN 1 753 IPR010341 -
Gso11g3549 754 MobiDBLite consensus disorder prediction 306 366 - -
Gso11g3549 754 MobiDBLite consensus disorder prediction 596 611 - -
Gso11g3549 754 MobiDBLite consensus disorder prediction 306 403 - -
Gso11g3549 754 Pfam Plant protein of unknown function (DUF936) 4 735 IPR010341 -
Gso11g3549 754 MobiDBLite consensus disorder prediction 145 160 - -
Gso11g3549 754 MobiDBLite consensus disorder prediction 734 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3549 Gso-Chr11 51273420 51278770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3549 - - gmx:100817734 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0256 15 2323792 2328750 Gso11g3549 11 51273420 51278770 GST
Gso11g3549 11 51273420 51278770 Gso12g0421 12 3677069 3682356 PCT
Gso11g3549 11 51273420 51278770 Gso11g1073 11 9593334 9598983 PCT
Gso12g0421 12 3677069 3682356 Gso11g3549 11 51273420 51278770 PCT
Gso11g1073 11 9593334 9598983 Gso11g3549 11 51273420 51278770 PCT