Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0401 ATGTCGTACGACGATGTGGAGATCGAGGATATGGAGTGGAACGAGGAGTTGCAGGCCTACACGTACCCGTGCCCGTGCGGGGACCTGTTCCAGATCACGAAGGAAGACCTTATGCTCGGCGAAGAAATCGCTCGATGCCCTAGCTGCTCTCTCTACATCACCGTCATCTACAACCTCGAAGATTTCCTCGCCGATTCCGATCAAAATCGACGAAACAAGGGCCTCCAACCTTCCAAGCAGCAACCCCTCACCGTTGCTTGA 261 0.5441 MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLMLGEEIARCPSCSLYITVIYNLEDFLADSDQNRRNKGLQPSKQQPLTVA* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0401 86 PANTHER DPH3 HOMOLOG-RELATED 2 72 IPR044248 GO:0017183|GO:0046872
Gso12g0401 86 SUPERFAMILY CSL zinc finger 2 72 IPR036671 -
Gso12g0401 86 Pfam CSL zinc finger 4 58 IPR007872 -
Gso12g0401 86 PANTHER DPH3 HOMOLOG 2 72 - -
Gso12g0401 86 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 2 58 IPR007872 -
Gso12g0401 86 Gene3D DPH Zinc finger 1 82 IPR036671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0401 Gso-Chr12 3529347 3531321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0401 K15455 - gmx:100500529 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0401 12 3529347 3531321 Gso11g1056 11 9429827 9431757 GST