Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1056 ATGTCGTACGACGATGTGGAGATCGAGGACATGGAGTGGAACGAGGAGTTGCAGGCGTACACGTACCCGTGCCCGTGCGGGGACCTGTTCCAGATCACGAAGGAAGACCTTAAGCTCGGCGAAGAGATTGCTCGATGCCCTAGTTGCTCTCTCTACATCACCGTCATCTACAACCTCGAAGATTTCCTCTCCGATTCCGATCAAAATCGACCAAACAAGGGCCTCCAACCTTCCAAGCAGCAACCCCTCACCGTTGCTTGA 261 0.5402 MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNLEDFLSDSDQNRPNKGLQPSKQQPLTVA* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1056 86 MobiDBLite consensus disorder prediction 67 86 - -
Gso11g1056 86 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 2 58 IPR007872 -
Gso11g1056 86 Gene3D DPH Zinc finger 1 82 IPR036671 -
Gso11g1056 86 PANTHER DPH3 HOMOLOG-RELATED 2 71 IPR044248 GO:0017183|GO:0046872
Gso11g1056 86 SUPERFAMILY CSL zinc finger 2 73 IPR036671 -
Gso11g1056 86 Pfam CSL zinc finger 4 58 IPR007872 -
Gso11g1056 86 PANTHER DPH3 HOMOLOG 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1056 Gso-Chr11 9429827 9431757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1056 K15455 - gmx:100500529 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0401 12 3529347 3531321 Gso11g1056 11 9429827 9431757 GST